Rafael Brada1, Michael Rotman1, Sangtae Ahn2, and Christopher J. Hardy2
1GE Reserach, Herzliya, Israel, 2GE Research, Niskayuna, NY, United States
Synopsis
We introduce a method for the automatic detection and scoring
for motion artifacts in 2D FSE images. The method is based on analyzing the
difference in k-space data between two coil array elements. The relative
motion score is a parameter free calculation. To match human observer rankings,
linear regression coefficients were calculated on a development set of seventeen
T1 brain series. The normalized score was tested on nine T1-FLAIR FSE brain series
achieving an R2 of 0.91.
The ability to automatically detect and grade the severity of motion artifacts
is important for better clinical workflows, and for research purposes.
Introduction
Patient motion during MRI exams is a significant
clinical problem, rendering scans sometimes clinically unusable and often requiring
rescans1. There are also indications that even subtle motion
artifacts affect structural measurements2,3. Over the years multiple
methods have been proposed for detecting and correcting for patient motion
during a scan4. Most current approaches require additional dedicated
hardware or use of navigator sequences. We introduce a novel motion scoring
algorithm compatible with standard FSE protocols that correlates well with a
human observer score (R2 = 0.91). The algorithm uses the k-space
data from two elements of the receiver array and produces signals indicative of
discrete motions and of continuous motions. The two signals are used to
calculate a combined motion score. From the discrete motion signal the timing
of the discrete motions can be calculated.Methods
We acquired 26 T1-FLAIR 2D FSE brain scans of subjects
instructeded to move their head in different motion patterns during the scan.
The motion patterns included different discrete motions and/or continuous head motion.
The number of discrete motions within each scan varied from 0 to 8. The
severity of the motion artifacts depends on the number of movements and their
timing. The motion artifacts are more severe for movements that take place
while the center part of k-space is being scanned. A scan order (Figure 1) was
used consisting of multiple echo trains of length 8. For T1-FLAIR each echo
train is acquired sequentially across slices before acquisition of the next
echo train. The motion signal is calculated by Fourier transforming a pair of complex
coil-intensity-corrected images from two of the coils in the receiver array
back into k-space, calculating their difference, projecting along the frequency-encode
direction as shown in Figure 2. The projected differences are then summed over all slices
(Figure 3a), followed by a self normalization step performed by subtracting and
dividing the signal by its minimum value (Figure 3b). The motion signal is then
calculated by summing over the different echo trains (Figure 3c). A discrete
motion signal (Figure 3d) is calculated by removing the baseline per k-space
region from the motion signal. 17 series were used as a development set and
9 series for testing. For each series the degree of motion artifact visible in
the images was ranked by 3 observers on a scale of 0-10, 10 being the most
severe motion corruption. The average observer value defined the user score.
The algorithmic motion score was calculated by linearly fitting the areas under
the curves shown in Figure 3c-d to the user ranking on the development set. The
final score was taken to be the linearly transformed area under the curve in
graph 3c if its value is greater than 3 and the transformed area under the
curve of graph 3d
otherwise. Results
The calibrated score was evaluated on a test set of nine
T1-FLAIR brain series. The subjects were asked to move their head between 0 to
8 times during the scan, with an average of 2 movements, and at different
times. The resulting images received a user motion score ranging from 0 to 10
with an average score of 4.6. The R2 value for the correlation
between the user score and the calculated score was 0.91. The correlation
between the user score and the calculated score on the test set and the
development set are shown in Figure 4.
Figure 5 shows images, taken from the test set, with different levels of
motion artifacts and their related user score and calculated score. One of the series,
which was listed as motion free in the protocol, exhibited slight motion artifacts,
and received a motion score of 1.4 by the algorithm and a user score of 1.Discussion
This work presents a novel approach
for detecting and scoring the severity of motion artifacts in MR images. The
method also provides the timing of discrete motions. This opens the door to
multiple future strategies for overcoming patient motion
and for answering research questions related to the presence and effect of
motion artifacts on quantitative and qualitative results of MRI exams. The work
needs to be extended to additional coil settings and scan protocols for
developing and validating a consistent motion score.Conclusion
We have developed a novel method for calculating a
motion-artifact severity score for 2D FSE images. The method was tested for
scoring the motion artifacts caused by rigid body movements, such as a subject’s
head movement during a brain scan. The calculated score closely correlates with
human visual perception of the artifacts’ severity. The method can be used to
detect the presence of both continuous and discrete motions during the scan.
The method can be used to time the discrete motions. The calculated motion
score integrates the contribution from both discrete and continuous movements.
The relative motion score is a parameter free calculation for a given
acquisition protocol. A perceptual motion score can be calculated by a linear
transformation applied to the relative motion score following a calibration
process.Acknowledgements
No acknowledgement found.References
- Jalal B.
Andre, MD. Toward Quantifying the Prevalence, Severity, and Cost Associated with
Patient Motion During Clinical MR Examinations. J Am Coll Radiol 2015; 12:689-695.
- Aaron
Alexander-Bloch et al. Subtle In-Scanner Motion Biases Automated Measurement of
Brain Anatomy From In Vivo MRI. Hum Brain Mapp. 2016 July; 37(7): 2385–2397.
doi:10.1002/hbm.23180
- M. Reuter, M.
D. Tisdall, A. Qureshi, R. L. Buckner, A. J. W. van der Kouwe, and B. Fischl,
``Head motion during MRI acquisition reduces gray matter volume and thickness
estimates,'' NeuroImage, vol. 107, pp. 107-115, Feb. 2015.
- F
Godenschweger et al. Motion correction in MRI of the brain. Phys Med Biol. 2016
March 7; 61(5): R32–R56. doi:10.1088/0031-9155/61/5/R32.