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Simulating the use of active magnetic markers for motion correction using NMR field probes on a 7T scanner
Laura Bortolotti1 and Richard Bowtell1
1Sir Peter Mansfield Imaging Centre, University of Nottingham, Nottingham, United Kingdom

Synopsis

We use simulations to demonstrate the feasibility of a novel approach to motion tracking, which is based on using a 16-probe field camera to monitor the fields generated by briefly passing currents through small coils affixed to the head. Using previously recorded head motion data we show that changes in head position can be accurately estimated from the measured field changes. The benefits of this approach are that problematic line-of-sight access to markers is not required (cf. optical approaches) and that it could be implemented without modification of the MRI sequence (cf. navigators).

Introduction

Head motion during image acquisition causes artefacts. These artefacts can be eliminated by using motion correction techniques based on tracking head pose using markers that are attached to the head 1, 2, 3. Here we use simulations to evaluate the feasibility of a novel approach to motion tracking, which is based on using a 16-probe field camera to monitor the fields generated by briefly passing currents through small coils affixed to the head. The benefits of this approach are that problematic line-of-sight access to markers is not required (cf. optical approaches) and that it could be implemented without modification of the MRI sequence (cf. navigators).

Methods

The simulated set-up is shown in Figure 1. Two, small solenoidal coils (100 turns; i.d. 5.2mm; o.d. 10.2mm; 2.5mm length) were positioned on the end-pieces of a pair of glasses. The two coils’ orientations were chosen to be approximately along the y- and z-axes. The z-component of the magnetic field from the coils is monitored using 16-field probes distributed over the upper part of the internal surface of the Tx RF coil. The magnetic fields generated at the fixed probe positions were calculated for each head position using analytic expressions for the field from solenoidal coils carrying a current of 0.3 A 4. Figure 2 shows the Bz-field generated at the probe-surface for one head pose, and the field-changes resulting from head pose changes during head nodding and head shaking.
To test the feasibility of tracking head motion using this approach, we simulated a time series (0.15s time-step) of field values produced at the probes (BC(t)) using head motion parameters measured previously during motion correction experiments using an MPT optical camera5,6. The motion parameter set (M(t)) characterises translations and rotations related to Cartesian axes in the scanner’s frame of reference. Motion parameters were then estimated from the 16 field-values recorded at each time point using the analytic field expressions. The prediction was performed using a Matlab function based on the Nelder-Mead Simplex optimization method6. The magnetic field change between consecutive time steps was used as the cost function. Given the value of the magnetic field at step n (BC(tn)), the value of the magnetic field at time tn+1 is estimated by iteratively changing the motion parameters used to move the coil system and evaluating the magnetic field, BP(tn+1). The algorithm converges to the predicted motion parameters (Mp(tn)) once the difference between the measured and estimated magnetic field changes reaches a fixed tolerance. The algorithm needs a starting guess for the motion parameters set (M0(tn)). For the first time step, M0(tn=1) was randomly extracted from a normal distribution with zero mean and deviation standard equal to the standard deviation of the motion parameters. For each subsequent time step, (M0(tn>1)), the guess was formed using a perturbation extracted in the same way, but scaled by 0.01, which was added to the previous prediction (Mp(tn-1)). We also evaluated the effect of adding white noise (10-9T std) to the simulated fields. Figure 3 shows the temporal variation of the motion parameter and simulated field values for 10s periods during rest, head-nodding and head-shaking conditions.

Results

The prediction of motion parameters from the simulated field changes was performed on 300 data points (spanning 45 s) for each movement condition. The resulting motion parameter predictions collated from all three conditions are shown in Figure 4 for data with added noise. The predicted values for each motion parameter p have been plotted against the actual data values d: ideal prediction results would follow a straight line with unit slope. Table 1 details the results of a linear regression of the predicted motion parameters to the actual values (slope, intercept, R2, the mean squared error (mse), and the Pearson coefficient (pc)).

Discussion

There is very good agreement between the predicted values for all motion parameters, indicating that head motion can be tracked using the combination of two coils and 16 field probes. The best results are obtained for rotations while translation in z is least accurately estimated. The first few predictions are most influenced by the initial random guess (M0(tn=1)) leading to greater prediction inaccuracy. The accuracy of the prediction is dictated by the choice of the stopping criteria of the algorithm and by the noise level. Inclusion of additional coils, which could be pulsed in combination with or, separately to, the initial coil pair would help to improve the localisation accuracy.

Conclusions

Head motion can be tracked by monitoring the fields produced by small coils attached to the head using a field camera. The good prediction accuracy achieved using simulated data indicate that it is worth implementing this approach experimentally to provide a marker-based motion correction technique that does not require line-of-sight access or significant modification of the image acquisition. This will require synchronisation of coil pulsation and field measurement with ‘quiet’ periods of the sequence and minimisation of RF and B0 field interactions with the coils.

Acknowledgements

No acknowledgement found.

References

1. Eschelbach M, Aghaeifar A, Bause J, et al. Comparison of prospective head motion correction with NMR field probes and an optical tracking system. Magnetic Resonance in Medicine (MRM). July 2018.

2. Wezel J, Boer VO, van der Velden TA, et al. A comparison of navigators, snap-shot field monitoring, and probe-based field model training for correcting B0 induced artifacts in T2 weighted images at 7T. Magnetic Resonance in Medicine. November 2017;78:1373-1382.

3. Aranovitch A, Haeberlin M, Gross S, et al. Motion detection with NMR markers using real‐time field tracking in the laboratory frame. Magnetic Resonance in Medicine. December 2019;84:89-102.

4. Dennison E. Magnet Formulas. 2018. Available at: https://nbviewer.jupyter.org/github/tiggerntatie/emagnet-py/blob/master/index.ipynb.

5. Bortolotti L, Bowtell R. Measurement of head motion using a field camera in a 7 T scanner, ISMRM 2020, Abstract number: 0464.

6. MatLab. fminsearch. MathWorks. Available at: https://uk.mathworks.com/help/matlab/ref/fminsearch.html.

Figures

The figure shows the simulated experimental set-up. Two coils are fixed onto the end-pieces of a pair of glasses. Each solenoidal coil was composed of 100 turns of 0.25mm- diameter wire arranged in 10 layers radially, each formed from 10 turns. The left and right coils are oriented along the y- and z-axes, respectively. The z-component of the magnetic field from the coils is monitored using 16 field probes spanning 21 cm axially and 22 cm azimuthally.

Coil positions (top) and z-component of the magnetic field4 on a cylindrical surface (bottom, BC ) (0.3A coil current). Probe positions are highlighted using circles (top) or line crossings (bottom). The field at the initial head-position is shown (left), along with the field changes produced by head pose changes during head nodding (middle) and head shaking (left) (motion parameters shown in Figure 3. Complex patterns of field change give high sensitivity to differences in motion.

(Top) smoothed 10-s time series of previously-measured head motion parameters (translations Tx, Ty and Tz in mm and rotations Rx, Ry and Rz in radians) during rest, head-nodding and head-shaking conditions. (Bottom) simulated field values (BC) at the 16 field probe positions with 0.3A current in the coils. The non-linear relationship between field and motion parameters is evident. All plots are shown with the mean values having been subtracted to highlight changes due to motion.

Plots of the predicted motion parameters (p) versus the actual values (d). From, the top left, plots show translation (T [mm]) and rotation (R [rad]) linked to the x,y and z axes in the scanner frame. Each plot also shows a linear fit to the data (black line) and a line of unit slope and zero intercept, corresponding to the ideal prediction (blue dashed line). Further analysis of the data plots is reported in Table 1. Without added noise predicted and actual values agreed perfectly.

Table shows the results of comparing the estimated and actual motion parameters dor simulated data with added noise with an RMS amplitude of 10-9 T. Values of the slope and intercept of the linear fit are reported along with the values of R2, the mean squared error and Pearson correlation coefficient, for each of the motion parameters. Best predictions were obtained for rotational parameters. Translation along the z-axis was least accurately estimated.

Proc. Intl. Soc. Mag. Reson. Med. 29 (2021)
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