Vladimir Grouza1,2, Zhe Wu1,3, Marius Tuznik1,2, Hooman Bagheri4, Dan Wu5, Alan C Peterson2,4,6, and David Rudko1,2,7
1McConnell Brain Imaging Centre, Montreal Neurological Institute and Hospital, Montreal, QC, Canada, 2Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada, 3Techna Institute, University Health Network, Toronto, ON, Canada, 4Department of Human Genetics, McGill University, Montreal, QC, Canada, 5Russell H. Morgan Department of Radiology & Radiological Science, Johns Hopkins University, Baltimore, MD, United States, 6Gerald Bronfman Department of Oncology, McGill University, Montreal, QC, Canada, 7Department of Biomedical Engineering, McGill University, Montreal, QC, Canada
Synopsis
We investigated a novel mouse model of CNS hypomyelination using T2* weighted mGRE and diffusion weighted imaging. By integrating a recently developed method for MWF estimation from mGRE data (BSS-rPCA), we observed strong correlations between Mbp/Golli mRNA expression levels and MVF in select WM tracts in the brain. In addition, WM tract g-ratio values computed from BSS-rPCA MVF combined with NODDI-derived parameters were consistent with those found in the literature computed using differing methods. These results support integrating BSS-rPCA MWF estimates into quantitative microstructure evaluation workflows.
Introduction
Well-characterized mouse models of central nervous system (CNS)
hypomyelination constitute an invaluable resource for benchmarking
imaging approaches to quantify myelin in the brain. By selectively
deleting one or more of the M1, M3, and M5 transcription enhancer
domains in the myelin basic protein(Mpb)/Golli locus, a graded
hypomyelination signal can be achieved in the mouse CNS.1 The
resulting relative decrease in Mbp/Golli mRNA expression achieved in
this way is summarized in Table 1. In this study, we investigated
the application of a recently developed, blind-source separation
robust principal component analysis (BSS-rPCA) to gradient echo-based
myelin water imaging of the aforementioned Mbp knockout (Mbp KO)
hypomyelination mouse model.2 BSS-rPCA estimates myelin water
fraction in brain tissue by separating the fast decaying, myelin
water T2* component from the remaining
intra/extra-cellular water and artefactual noise signals. It
represents a valuable method for ex-vivo myelin water fraction
(MWF) imaging given the shortened T2* of myelin
water in fixed brain tissue.3 In addition, we investigate BSS-rPCA
within the context of the MRI g-ratio paradigm.4 This was done by
combining MWF estimates from BSS-rPCA with axon water fraction (AWF)
estimates obtained by fitting the neurite orientation dispersion and
density (NODDI)5 model to diffusion weighted data acquired from
the Mbp KO hypomyelinated mouse brain.Methods
Gluteraldehyde fixed brains of 13 adult mice (P30) were used in this
study. The number of brains corresponding to each enhancer KO line is
detailed in Table 1. All imaging was performed using the Bruker
(Rheinstetten, Germany) Pharmascan 7T MRI system. Diffusion weighted
volumes (b-values: 30 directions at 2500 s/mm2; 60
directions at 4000 s/mm2; matrix size 80x64x90; 150 um
isotropic spatial resolution) were acquired using a custom
diffusion-weighted gradient and spin echo (dwGRASE) sequence.6
Multi-exponential T2* weighted volumes (2 msec
first echo time and 2 ms echo spacing; 24 echoes; matrix size of
135x106x120; 100 um isotropic spatial resolution) were acquired using
a 3D multi-echo gradient recalled echo (mGRE) sequence. Whole brain
MWF maps were reconstructed using the BSS-rPCA method.2 These were
converted to myelin volume fraction (MVF) maps using a
previously-described volumetric model of white matter.7 The NODDI
model (Din=0.75x10-3mm2/s; Diso=2.0x10-3mm2/s) was
implemented using AMICO software.8,9 In combination with MVF,
NODDI-derived parameter maps were used to compute whole brain axon
volume fraction (AVF) and g-ratio maps.10 AVF, MVF, and g-ratio
maps were then registered to a high resolution (matrix size of
315x478x241; 40 um isotropic) anatomical atlas11 using linear
affine registration followed by non-linear symmetric diffeomorphic
registration.12 The resulting registered image volumes were used
for region of interest (ROI) analysis. Anterior commissure (AC),
internal capsule (IC), and splenium of the corpus callosum (CC) ROI
masks were obtained using semi-automated segmentation using ITK-SNAP
[13]. Finally, Pearson’s correlation coefficient was computed to
evaluate the quantitative relationship between Mbp/Golli mRNA
accumulation and MVF within the chosen ROIs.Results and Discussion
Whole brain parameter maps of AVF, MVF, and g-ratio were computed for
all enhancer knockout mouse lines. When comparing coronal MVF slices
calculated from the wild-type and the most severely hypomyelinated
(M1M3M5KO) brains, a pronounced decrease in white matter (WM) tract
myelination is evident from visual inspection (Figure 1). High
fractional anisotropy (FA) values were observed in major white matter
tracts of all genotypes reflecting the limited sensitivity of FA to
microstructural changes in the hypomyelinating mouse lines. Decreased
MVF with decreasing Mbp/Golli transcription was evident in all WM
tract ROIs. Since AVF and g-ratio are mathematically dependent on
MVF, the opposite trend was observed in those parameter maps (Figure
2). The Wilcoxon rank sum z-statistic in MVF between WT and M1M3M5KO brains evaluated to 49.7, 75.4, and 80.7 in the AC, CC, and IC respectively, indicating a large difference based on the underlying distributions of voxel values.
There was a strong linear correlation between Mbp/Golli mRNA
expression and MVF in white matter ROIs. Specific Pearson’s linear
correlation coefficients relating mRNA expression to MVF are shown in
Table 2 and the data is plotted in Figure 3. Our g-ratio estimates
are in line with those reported in previous literature.10 It should
be noted, however, that our study used multi-exponential T2*
decay and BSS-rPCA to measure MWF, rather than more conventional
CPMG-based MWF approaches.10 This encouraging result supports the
integration of BSS-rPCA derived MWF maps for ultra-high resolution
mapping of MVF in pre-clinical models of human neurological
disorders. Moreover, it supports the concept that multi-exponential
T2* decay mapping may represent a surrogate
method for high resolution myelin water imaging and voxel g-ratio
estimation.Conclusion
MRI microstructure-based
characterization of a novel hypomyelination mouse model with
selective deletion of Mbp
transcription enhancer domains revealed tract-specific reductions in
MVF associated with more the severe hypomyelination phenotypes
included in our study (M3M5KO and M1M3M5KO enhancer lines).
Reductions in MVF in selected tracts were paralleled by corresponding
increases in the voxel-averaged g-ratio calculated from MRI. The
findings of our work support Mbp mRNA level as a very important
determinant of myelin bilayer formation. Our study also provides
evidence that multi-exponential T2* decay-based MWF mapping using
BSS-rPCA is a robust alternative for high resolution myelin water and
voxel g-ratio quantification in pre-clinical models.Acknowledgements
The authors gratefully acknowledge the support of the McConnell Brain Imaging Centre staff and funding for the study from the NSERC Discovery Grant of Dr. David Rudko.References
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