Datta Singh Goolaub1,2 and Christopher Macgowan1,2
1Medical Biophysics, University of Toronto, Toronto, ON, Canada, 2Translational Medicine, The Hospital for Sick Children, Toronto, ON, Canada
Synopsis
In this study, we demonstrate a new non-Cartesian
trajectory scheme to reduce clustering of trajectory arms during CINE
reconstruction, while still allowing for real-time reconstructions. In this
scheme, trajectory arms are incremented within temporal blocks and additional
angles are played between blocks. These added angles are optimized to perturb trajectory
coherence during CINE reconstruction, as demonstrated through simulations showing
reduced clustering and improved CINE image quality.
Introduction
Non-Cartesian MRI acquisitions, such as radial or spiral acquisitions,
have several advantages. They are more robust to motion artifacts than
Cartesian sampling because they oversample the center of k-space with
each acquisition. Furthermore, they provide real-time reconstructions enabling
retrospective motion correction or gating1. Hence, they are promising for
imaging fetuses, neonates, and non-cooperative subjects.
Traditionally, these acquisitions involve performing successive readout
trajectories at regularly incremented angles, such as by the golden angle2. However, one drawback with this
implementation is the occurrence of clustering of readout trajectories after
data is sorted into cardiac phases for CINE reconstruction. At certain
combinations of acquisition repetition times (TRs) and heart rates (HRs),
closely spaced trajectories are binned into the same cardiac phase resulting in
coherent aliasing artifacts that degrade image quality. These artifacts become
highly problematic when using accelerated imaging with reconstruction
techniques such as compressed sensing3.
Here, we propose a technique to reduce trajectory clustering after
gating is applied while also allowing uniform sampling for real-time
reconstructions. It involves playing additional angles between blocks of
traditional readouts. These angles are then optimized to minimize clustering
artifacts for a given protocol.Methods
Design Constraints: Two design constraints must be addressed. Firstly,
for the duration of a real-time image frame (TRT), trajectories must cover k-space in a
quasi-uniform distribution. Secondly, after cardiac gating, the trajectories
must be resorted into cardiac phases with minimal clustering. To achieve this,
trajectories are incremented with a constant angle (Δθ) over a block of duration TRT. After each block, an
additional angle (Ɛi after ith block) is applied once to disrupt the pattern (Figure
1).
Appropriate values for Ɛ
may be determined through numerical simulation, by finding a set of Ɛ that minimizes a metric for
trajectory clustering over a physiological range of constant HRs. The metric
chosen for this work is the standard deviation of trajectory angular differences
(S). For example, uniform radial sampling of k-space has S
being 0. In the presence of clustering, a skewed distribution of trajectory
angular differences arises, and as clustering increases, S increases.
The loss function is calculated over a range of typical HRs and then
summed over all HRs to give a global loss. The optimal Ɛ is then obtained by minimizing the global loss function:
$$ \min_{Ɛ}{\sum_{rr}{\sigma(R_{rr,c}(K(Ɛ))}}$$
where σ is the standard deviation operator, Rrr,c is the operator
sorting the trajectories into c cardiac phases based on heart rate rr,
and K is the calculated trajectory angles based on Ɛ. Particle swarm optimization (PSO) is used to minimize S as the
landscape of the loss function is non-smooth and non-convex4. The PSO comprises 40 particles
which are initially at random Ɛ values
and iteratively converge towards a global minimum.
Optimization: This technique to reduce
clustering is demonstrated in the use of radial acquisitions in fetal cardiac MRI through three simulations. In each simulation, radial trajectories were simulated with
TR = 6.6 ms, TRT = 422.4 ms, scan duration = 10 s, and in each block
Δθ = golden angle. The CINE comprised 15 cardiac phases. The
simulations differed only by the value of Ɛ: (1) traditional scanning: Ɛ = 0, (2) random: Ɛ ~ randomly
distributed between 0 and 2π [performed 10 times], and (3) optimal: Ɛ optimized with the
PSO above. The behaviors of the different sets of Ɛ were also analyzed using the entropy of
the resulting point spread function (PSF). Representative
reconstructions with compressed sensing were performed using each set of Ɛ to demonstrate reduction of artifacts.Results
Figure 2A displays the values of S for each pattern of Ɛ, across a physiological range of
fetal HRs. With Ɛ = 0 (blue line), peaks in S are
evident at specific HRs, corresponding
to high clustering in k-space. Conversely, these peaks are
suppressed when using random (red) and optimal (black) Ɛ with reduced
variability in S as in Figure 2B-D. The optimal set of Ɛ leads to the best overall reduction
in S. Figure 3A displays the entropy of the PSF versus HR for the three
sets of Ɛ with their histograms in
Figure 3B-D. The optimized Ɛ
has a consistently high entropy with low variation, denoting more incoherence
in sampling. Figure 4 shows representative reconstructions in simulated k-space
from a fetal slice showing the 3-vessel view. With Ɛ = 0, the reconstruction contains streaking
artifacts that make the anatomy less conspicuous. With random Ɛ, there is
visual improvement in the reconstruction. With optimal Ɛ, there is further
improvement with some edges, such as the fetal surface, becoming less blurred.Discussion
The method proposed here allows for a more incoherent k-space for
CINE reconstructions and windows of acquisitions to be reconstructed into
real-time series. While the optimization is performed over constant fetal HRs,
variations in HR naturally improve incoherence in CINEs. Since optimization of Ɛ must be
performed for a set of typical HRs for a given protocol setting (for instance, number of readouts or
TR), random Ɛ provides a good alternative to
minimize clustering for imaging requiring in-scan changes.Conclusion
We have proposed and demonstrated a novel sampling pipeline to minimize
coherence in non-Cartesian k-space.Acknowledgements
No acknowledgement found.References
1. Goolaub DS, Roy CW, Schrauben E, et al. Multidimensional
fetal flow imaging with cardiovascular magnetic resonance: a feasibility study.
Journal of Cardiovascular Magnetic Resonance. 2018;20(1):77.
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Golden-angle radial sparse parallel MRI: combination of compressed sensing,
parallel imaging, and golden-angle radial sampling for fast and flexible
dynamic volumetric MRI. Magn Reson Med. 2014;72(3):707-717
3. M, Donoho D, Pauly JM.
Sparse MRI: The application of compressed sensing for rapid MR imaging. Magn
Reson Med. 2007;58(6):1182-1195.
4. R, Kennedy J, Blackwell T.
Particle swarm optimization. Swarm Intell. 2007;1(1):33-57.
doi:10.1007/s11721-007-0002-0