Jochen Keupp1, Petra J. v. Houdt2, Jakob Meineke1, Paul de Bruin3, Johannes M. Peeters3, Leon ter Beek4, and Mariya Doneva1
1Philips Research, Hamburg, Germany, 2Department of Radiation Oncology, The Netherlands Cancer Institute, Amsterdam, Netherlands, 3Philips Healthcare, Best, Netherlands, 4Department of Medical Physics, The Netherlands Cancer Institute, Amsterdam, Netherlands
Synopsis
T2w-MRI plays
an important role in prostate cancer providing information on the location and
aggressiveness in diagnosis and therapy. T2-mapping may provide objective
characterization, but is hampered by long acquisition time, which has been
addressed by dedicated acceleration techniques (e.g. k-t T2-mapping). We
investigated T2-mapping in a prostate cancer patient based on a 4-minute
protocol with Poisson-disk prospective irregular sub-sampling in the ky-TE
domain in combination with a low rank and sparsity constraint compressed
sensing reconstruction. The regularization parameters were investigated, and
compressed sensing results were compared to separately acquired k-t T2-maps
with respect to quality and noise.
Introduction
T2-weighted MRI plays an important role in prostate cancer (PCa)
providing information on the location, volume and grade in diagnosis/therapy
planning or active surveillance. However, the qualitative nature of these
images complicates the objective comparison between patients as well as the
quantification of treatment response. To address this, T2-mapping is explored
for objective PCa characterization1 and monitoring2. Non-accelerated
multi-echo spin-echo (MESE) T2-mapping with good coverage and high resolution (≤1mm) is prohibitively slow.
Previously, k-t T23 was proposed for T2-mapping and successfully
applied in patient studies4, achieving a scan time of 4½ minutes (60 mm coverage FH, 12
echoes). Here, aliasing artifacts are reduced by trained kernels in ky-TE
domain. Mono-exponential decay is assumed, and regular sub-sampling is required,
which may bias T2-values and limit acceleration. Thus, T2-mapping using compressed
sensing over echo times as extra dimension (T2-CSXD) was proposed5. The
prior knowledge used in T2-CSXD is more generic, potentially enabling higher
acceleration with irregular sub-sampling. In this study, we directly compare T2-CSXD, using various regularization
settings, with k-t T2 in prostate tissue for identical resolution and scan time,
including short-T2 cancerous areas. Methods
Details on T2-CSXD mapping are provided in reference 5. In short, irregular sub-sampling
along the TE dimension was implemented by introducing ky blip
gradients during a MESE readout. Reconstruction used a fast low-rank and
sparsity regularization algorithm6, solving the following
minimization problem for N echoes:
$$\underset{M}{arg\ min}=(\frac{1}{2}\| EM-P \|^2_2+\lambda_1 \| W(M) \|_1+\lambda_2 \| M \|_*)$$,
where M is a matrix with N columns
of vectorized echo images, P a matrix
of N measured k-spaces, E the encoding matrix, including sub-sampling and
coil sensitivity maps, W the wavelet transform, $$$\| \|_*$$$ the nuclear norm. Regularization
parameters were varied, 0≤λ1≤0.6, 0≤λ2≤0.003, to investigate regularization
dependent image quality, T2-bias and standard deviation (SD). Reconstruction
was implemented within the MR software but run on a workstation for different
regularizations, with standard maximum-likelihood fitting to generate T2-maps
from the echo series.
A PCa
patient was scanned with both k-t T2 and the proposed T2-CSXD technique on a 3T
MRI system (Ingenia, Philips, NL) with informed consent, protocol approved by the institutional
review board. k-t T2 and T2-CSXD: FOV = 170x170x60mm3, voxel size
=1x1x3 mm3, TR = 5000 ms, 12 echoes, TEn = (32 + n*16) ms, α=90°, refocusing control 120°, B1max=9.5μT. For T2-CSXD: Acceleration R=10, irregular Poisson-disk sampling in ky-TE,
7 central fully sampled lines, acquisition time 4:10 min. For k-t-T2: Partial-Fourier
factor 0.6, R=8 (2×SENSE, 4×ky-TE sub-sampling), 4 autocalibration
lines, kernel 3×3×9 (M, P, echo), acquisition time 4:17 min.
To compare the T2-maps, three single slice ROIs were delineated
(diameter of 3mm) in regions within the prostate with low (83ms), intermediate
(145ms) and high (220ms) mean T2-values (<T2>). The relative difference ΔT2[%] of <T2> between k-t T2 and T2-CSXD and the relative
SD[%] for T2-CSXD were investigated as a function of the regularization
parameters. Results
Fig.1 shows example slices from a PCa patient, including a T2w
anatomical image (Fig.1A), k-t T2 results (Fig.1B,D) and T2-CSXD results
(Fig.1C,E) with regularization λ1=0.02/λ2=0.0007. Single echo images at TE=128ms
(Fig.1D,E) show a good image quality for both methods, with slightly less noisy
appearance of T2-CSXD. The T2 map quality appears improved with less apparent
noise for T2-CSXD. This is confirmed by lower SD-values found in the ROI
analysis for T2-CSXD, particularly for low <T2> (SD<5% for 83ms
for a large range of regularizations), in comparison to k-t-T2 (SD=13±0.5% for all ROIs/<T2>).
Fig.2 represents the regularization parameter assessment, using (λ1, λ2) as (x,y)
coordinates and measured ΔT2[%] (Fig.2A,C)
or SD (Fig.2B,D) as z-coordinate in a 3D plot. A smoothed-spline
surface highlights the trends. Data for low <T2> (Fig.2A,B) and intermediate <T2> (Fig.2C,D) are shown. For short <T2>, SD reaches a minimum at λ1=0.08 (Fig.2B), while for mid-range <T2>, SD is observed to further decrease for larger λ1 (Fig.2D). For large <T2> (data not
shown), a minimum is found for small λ1<0.1. T2-CSXD
values are in general a few percent lower than those obtained by k-t T2 and decrease
further with increasing λ1 and λ2.Discussion & Conclusion
T2-CSXD showed distinct surface patterns
in (λ1, λ2) for different T2-ranges, which guides regularization for specific acquisition parameters (e.g., Nechoes). Without regularization, sub-sampling artefacts and noise-amplification
are expected, leading to a high SD (noise). With increased λ1, reconstruction is stabilized, and
artefacts/noise reduced, explaining the observed SD decrease. SD-increase for
large λ1 is
expected due to wavelet artifacts. Short-T2 areas (low SNR) are expected
to be more affected by wavelet artifacts (faster SD-rise with λ1). Increased
bias in T2 is expected at large λ1/λ2 as reconstruction
relies increasingly on prior knowledge introduced by the regularization and
less on measured data. As a limitation, T2-bias is
also expected for k-t-T2 such that no absolute reference is available. Short T2<100ms are typical for tumor tissue at 3T, reliably detected
using 0<λ1<0.1
and λ2<0.001,
according to our data. As regularization-dependent quality is varying for
T2-value ranges, a compromise for relevant T2-values in PCa (80-150 ms) can be established.
In conclusion, T2-maps using 10× acceleration were obtained in a PCa
patient with promising quality and within clinically relevant acquisition time,
using a T2 CS technique with fine-tuned regularization.Acknowledgements
No acknowledgement found.References
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