Shinho Cho1, Arani Roy2, Chao Liu2, Djaudat Idiyatullin1, Wei Zhu1, Yi Zhang1, Xiao-Hong Zhu1, Prakash Kara2, Wei Chen1, and Kâmil Uğurbil1
1Center for Magnetic Resonance Research and Department of Radiology, University of Minnesota, Minneapolis, MN, United States, 2Center for Magnetic Resonance Research and Department of Neuroscience, University of Minnesota, Minneapolis, MN, United States
Synopsis
Using
high isotropic resolution (250 μm), cerebral blood volume weighted (wCBV) fMRI, we examined whether layer-specific cortical signals could be
detected upon visual stimulation in cat primary visual cortex. We also examined
single blood vessel responses (dilation, blood flow) to identical stimuli by
using 2- and 3-photon imaging in the same cortical area and species. With fMRI,
we often found orientation preference maps tangential and orthogonal to the cortical surface.
Moreover, the laminar
profile of orientation selectivity with
both imaging techniques (fMRI and optical) revealed a selectivity index that
was significantly lower in cortical layer 4 compared to layer 2/3.
INTRODUCTION
Neural circuits in the neocortex have a
stereotypical organization, e.g., input layers are distinct from output layers.
It cannot be assumed a priori that signatures of these laminar
differences in neural circuitry are reflected in hemodynamic signals mediated
by neurovascular coupling that form the basis of fMRI. If such laminar
differences in fMRI signals could be detected, validation with single-vessel
resolution would represent a critical step in demonstrating the utility of fMRI
as a proxy for studying aspects of laminar neural processing. The cat primary
visual cortex, with its well-established neural functional micro-architecture (1-4), provides
an ideal opportunity to examine these questions.METHODS
Animal
preparation:
32 cats (0.8–1.6 kg, 4-16 postnatal weeks) were used for fMRI (n = 7) and optical imaging (n = 13). Animals were initially anesthetized
(ketamine cocktail, 10–20 mg/kg) and subsequently maintained with 0.8-1.1% isoflurane.
For wCBV fMRI, a contrast agent (Feraheme® 0.75 cc/kg) was delivered
through the femoral vein. For multi-photon imaging, Alexa 680 dextran, Texas
Red dextran or fluorescein dextran was used to image individual blood vessels. Vital signs were maintained in accordance with the protocol approved by the
University of Minnesota Institutional Animal Care and Use Committee.
Visual stimulation: Drifting square-wave grating visual stimuli were
used (2 Hz temporal period, 4–8 orientations and thus double the number of
directions).
Functional imaging: All scans were performed on a 9.4T MRI system (Agilent, CA) with custom-made 15-mm diameter radio frequency
(RF) coil. Structural imaging used flow-compensated RF-spoiled GE sequence
(matrix=256×256, FOV=32×32 mm, 125 μm isotropic resolution, 10-12 slices, TR=119.86
ms, TE=5.1 ms). wCBV fMRI used 2D segmented (n=4) gradient echo EPI sequence (matrix=80×80, FOV=20×20 mm, 250 μm
isotropic resolution, 6-8 slices for axial and 1-3 slice for sagittal/coronal
imaging, TR=2 secs, TE=10 ms).
Optical imaging: 2- and 3-photon optical imaging was carried out with
a customized microscope (Bruker Ultima with 25x and
16x objective lenses, Olympus) and appropriate laser sources (5); the laminar boundaries (dorsal start and ventral end) of cortical layer was determined by post-mortem histology using
vGlut2 antibody labelling and found to be 640–1150 μm from the
pial surface (see dashed vertical lines in Fig. 2C). Our unpublished data in
cats shows that vGlut2 selectively labels the afferent terminals arriving from
the visual thalamus in cortical layer 4.
Data analysis: fMRI data underwent pre-processing using the Analysis of Functional Neuroimages (AFNI), (6) (slice-timing correction,
motion correction, 250 μm spatial smoothing, 0.01
–
0.3 Hz bandpass temporal filter). Then General
Linear Model (GLM) was applied. Optical imaging analysis was carried out as
described previously for vessel dilation and blood
velocity (4). The
orientation tuning curve was estimated with Von Mises function fitting (7) and orientation
selectivity index (OSI) (8) was calculated based on the following formula (9): OSI = abs(∑krkei2θk / ∑krk ), where
is the mean wCBV response (-
) in fMRI data or vessel
dilation or blood velocity in optical imaging data across
trials to stimulus of orientation.RESULTS
The average stimulus-induced percent signal change in
wCBV fMRI was -4.2±1.0%, reaching statistical significance in all
layers (F-stat > 4, P <0.001,
false-discovery rate [FDR] corrected) (Fig. 1); the
maximum activation was detected within the middle cortical layer (950 μm depth from cortical surface) (Fig. 1C and 1D), consistent with previous wCBV
fMRI findings (10). 3D Orientation mapping based on
voxel-wise wCBV responses revealed a predominantly columnar arrangement of
orientation preference perpendicular to cortical surface (Fig 2); OSI in all animals, calculated
from wCBV fMRI, displayed a distinctive depth-specific variation (Fig. 2C) with lowest OSI in middle cortical
layer (950 μm depth). Multi-photon optical imaging
revealed single blood vessel responses in layer 4 which also had lower OSI than
in layer 2/3 (Fig 3). Comparing the OSI
for the two different imaging techniques, showed an equivalent statistical difference
(P < 0.05) between layer 2/3 and
layer 4 selectivity (Fig. 4).DISCUSSION
Previous single-unit
extracellular electrophysiological recordings in the cat (11) showed columnar organization of orientation preference
across cortical layers. However, it is not known if this columnar
representation would be detectable by fMRI methods since laminar organization
of sub-threshold (synaptic) activity and vascular responses that would also impact
fMRI signals is completely
unknown. Previous fMRI studies obtained cortical
orientation maps on the cortical surface (10, 12) but lacked the voxel
resolution to delineate orientation tuning
across cortical layers. Here we show a mostly columnar
organization of orientation preference across cortical layers detected by wCBV
fMRI. Critically, we also show a layer-dependent
variation in orientation selectivity index with two independent techniques
(fMRI and optical imaging); specifically,
cortical layer 4 displays significantly less orientation-selective responses
than cortical layer 2/3.CONCLUSION
Our findings lay the groundwork for future expansion of such comparisons
between fMRI data obtained with different approaches (e.g. variants of BOLD
fMRI and VASO) and aspects of neuronal activity monitored across lamina by
multiphoton imaging using reporters that respond to aspects of neuronal spiking
and synaptic activity (e.g., calcium and glutamate imaging (4)) towards providing a better understanding of how
laminar differences in neuronal activity are reflected in neurovascular
coupling and hemodynamic signals reported in fMRI techniques.Acknowledgements
This work was supported by NIH grants: R01
MH111447, R01 MH111413, R01 NS118330, P41 EB027061 and P30 NS076408; and WM KECK foundation.References
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