Enping Lin1, Yu Yang1, Yuqing Huang1, and Zhong Chen1
1Department of Electronic Science, Xiamen University, Xiamen, China
Synopsis
DOSY (Diffusion-ordered NMR
spectroscopy) presents an essential tool for the analysis of compound mixtures.
However, existing DOSY reconstruction methods is limited by its relatively low
resolution. Here, based on constraints on low rank and sparsity of DOSY data,
we propose a reconstruction method to achieve high-resolution DOSY spectrum for
measurements on complex mixtures, even when component signals are congested and
mixed together along the spectral dimension. Experiment results indicate that
our method is robust and possesses high-resolution reconstruction performance.
Introduction
DOSY1 presents an
effective tool for identifying chemical substances in mixtures and detecting
intermolecular interactions2, by differentiating NMR signals of a
compound mixture according to differences in the molecular translational
diffusion. High-resolution DOSY reconstruction requiring excellent peak
alignment and narrow peak width in diffusion dimension. Unfortunately, these
two objectives are difficult to achieve concurrently, particularly for
measurements on complex mixtures that contains congested 1D NMR resonances.
Here, based on constraints on low rank and sparsity of DOSY data, we propose a
reconstruction method to achieve high-resolution DOSY spectrum with excellent
peak alignments and accurate diffusion coefficients for measurements on complex
mixtures, even when component signals are congested and mixed together along
the spectral dimension.Methods
A 2D DOSY spectrum has a
chemical shift dimension and a diffusion coefficient dimension. By Fourier
transforming on FID data along direct dimension, we get PFG (Pulse Field
Gradient) signals which are a kind of exponential decaying signals along
indirect dimension. In order to obtain DOSY reconstruction spectrum, ILT
(Inverse Laplace Transform) is performed on PFG signal along indirect dimension
to figure out the decay rates. The integrated DOSY data processing flow diagram
is illustrated in Figure 1.
The desired DOSY spectrum
should have narrow lineshape to ensure the spectral resolution, and with peaks well-aligned
along the diffusion dimension. In mathematical terms, the ideal DOSY data
matrix should be sparse and with low rank. In addition to non-negativity of
DOSY spectrum data, we proposed a joint low rank and sparse inverse Laplace
transform (LRSpILT) modelled as (1).
\[\mathbf{X}=\underset{\mathbf{X}\succcurlyeq
\mathbf{0}}{\mathop{\arg \min }}\,\frac{1}{2}\left\| \mathbf{KX}-\mathbf{S}
\right\|_{F}^{2}+{{\lambda }_{1}}{{\left\| \mathbf{X}
\right\|}_{*,b}}\text{+}{{\lambda }_{2}}{{\left\| \mathbf{X}
\right\|}_{1,\mathbf{A}}}\]
where $$$\mathbf{K}\in
{{\mathbf{R}}^{p\times n}}$$$ denotes Laplace transform matrix, $$$\mathbf{S}\in
{{\mathbf{R}}^{p\times m}}$$$ is the discretized gradient field attenuation
signal. $$$\mathbf{X}\in {{\mathbf{R}}^{n\times m}}$$$ is the DOSY spectrum data
matrix, which needs to be reconstructed.$$$ {{\left\| \bullet \right\|}_{*,b}}$$$is the weighted nuclear
norm with the weighted factor vector $$$b\in {{\mathbf{R}}^{1\times r}}$$$, which
constrains the low-rank of X. The
weighted nuclear norm is defined as:
\[{{\left\|
\mathbf{X} \right\|}_{*,\mathbf{b}}}=\sum\limits_{i=1}^{r}{{{b}_{i}}{{\sigma
}_{i}}}\]
where $$${{\sigma }_{i}}$$$ is
the i-th singular value of X, and r is the rank of $$$\mathbf{X}\$$$. A is the weighted l1 norm of the matrix, and $$$\mathbf{A}$$$ is
the weighted factor matrix which constrains sparsity of X. $$${{\lambda }_{1}}$$$ and $$${{\lambda }_{2}}$$$ denote the regularized parameters, which trade off the
nuclear norm and l1 norm, respectively. $$$\mathbf{X}\succcurlyeq
\mathbf{0}$$$ constrains non-negativity of all elements in X. We utilize ADMM (Alternative Direction Multiplier Method)3
to solve (1) and obtain high-resolution DOSY.Result
Through the reconstruction
of sample QGC4 shown in Figure 2, we can see that spectral peaks of
mono-exponential fitting5 reconstruction spectrum (Figure 2a) have
some deviation from the reference lines and even artefacts, which might give
rise to incorrect analysis of molecular components, and peaks are broadened
along the diffusion dimension and serious peak overlapping is observed in the
SILT6 reconstruction spectrum(Figure 2b). Our method (Figure 2c) performs
better in peak alignment than mono-exponential fitting and has narrower peaks
than SILT. Through analysis of peaks (highlighed in Figure 2(b)(c)) shown in
Figure 4, the width at half higheit of spectral peak of our method is
approxiamtely 4 times narrower than that of SILT. From spectra of separated 1D
components shown in Figure 3, compared with reference spectra (Figure 3 (a)) we
can see that there are clearly some artefacts in SILT results (Figure 3 (b)),
while our method results present more accurate diffusion measurements with
higher resolution in the diffusion dimension (Figure 3 (c)). In a word, our
method balances well between peak alignment and narrow peaks and therefore
achieves high-resolution DOSY reconstruction.Acknowledgements
This
work was supported by the National Natural Science Foundation of China under
grant numbers 61601386 and 11761141010.References
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