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Exploring effects of membrane permeability on dMRI metrics with Analytical solutions and Monte Carlo simulations
Zihan Zhou1, Qiuping Ding1, Hongjian He1, and Jianhui Zhong1,2
1Center for Brain Imaging Science and Technology, Key Laboratory for Biomedical Engineering of Ministry of Education, College of Biomedical Engineering and Instrumental Science, Zhejiang University, Hangzhou, China, 2School of Medicine and Dentistry, University of Rochester Medical Center, New York, NY, United States

Synopsis

White Matter Tract Integrity (WMTI) is a biophysical model with specificity to underlying tissue microstructures. However, recent work has suggested that inter-compartmental water exchange may affect outcomes of the model metrics. In this work, we analytically relate the WMTI-derived dMRI metrics to membrane permeability, and validate our predictions using Monte Carlo simulations. Our results show that the water exchange has a non-trivial effect on the metrics and needs to be carefully considered in WMTI.

Introduction

Water exchange is mostly ignored in the models of quantitative diffusion, such as White Matter Tract Integrity (WMTI) 1. However, recent studies have suggested that the water exchange still significantly affects MRI measures of tissues ex vivo 2 and in vivo 3. Here, we performed Monte Carlo (MC) simulations to investigate how water exchange process contributes to the WMTI-based metrics, namely axon water fraction (AWF) and mean kurtosis (MK).

Theory

Based on biophysical reality, there are three compartments, namely intra-axonal (i), myelin sheath (m), and extra-axonal (e) compartments in the neuronal microenvironment. When water exchange among different compartments is considered, they can be modeled by a probabilistic change in the state of a molecule $$$s(t)$$$, which is described by a probability vector $$$\boldsymbol{p}(t)=[p_{i}(t), p_{m}(t),p_{e}(t)]'$$$ with $$$p_{i,m,e}(t)$$$ being the probability of each compartment. Owing to exchange, the probability distribution evolves as follows,$$\frac{\mathrm{d} \boldsymbol{p}(t)}{\mathrm{d} t}=K\boldsymbol{p}(t), (1)$$where the matrix $$$K$$$ is given by$$K: = \begin{bmatrix}-k_{im} &k_{mi} &0 \\ k_{im} &-k_{mi}-k_{me} &k_{em} \\ 0 &k_{me} &-k_{em} \end{bmatrix}, (2)$$ and $$$k_{im}$$$ and $$$k_{mi}$$$ are water exchange rates between intra-axonal compartment and myelin while $$$k_{em}$$$ and $$$k_{em}$$$ are water exchange rates between extra-axonal compartment and myelin. Given that signals from myelin could not be detected as assumed in WMTI model 1, we simplified Eq. (2) to $$K: = \begin{bmatrix}-k_{ie} &k_{ei}\\ k_{ie} &-k_{ei}\end{bmatrix}, (3)$$ Then signal is given by$$\begin{bmatrix}\frac{\partial s_{i}}{\partial t}\\ \frac{\partial s_{e}}{\partial t}\end{bmatrix}=\begin{bmatrix}-q^{2}D_i-k_{ie} &k_{ei} \\ k_{ie} &-q^2D_i-k_{ei} \end{bmatrix}\begin{bmatrix}S_i(q,t)\\ S_e(q,t)\end{bmatrix}. (4)$$
For the kurtosis and AWF, we obtain,$${MP}_p(\cdot )={MK}_a(\cdot )\cdot h(\cdot ), (5)$$ $$AWF=\frac{K_{max_a}\cdot h(\cdot )}{K_{max_a}\cdot h(\cdot )+3}, (6)$$
where $$$MK_p(\cdot )$$$ is mean kurtosis value in presence of water exchange while $$$MK_a(\cdot )$$$ is mean kurtosis value in absence of water exchange, and $$$h(\cdot )$$$ is derived previously,4$$h(\cdot )=\frac{1}{k_{ie}\cdot \frac{1}{v_i}\cdot \Delta }-\frac{1}{{(k_{ie}\cdot \frac{1}{v_i}\cdot \Delta )}^{2}}+\frac{e^{-k_{ie}\cdot \frac{1}{v_i}\cdot \Delta }}{{(k_{ie}\cdot \frac{1}{v_i}\cdot \Delta )}^{2}}, (7)$$
where $$$k_{ie}$$$ is water exchange rate from intra- to extra-axonal compartment, and $$$k_{ie}=P\cdot \frac{area}{volume}$$$, $$$v_i$$$ is the volume fraction of intra-axonal compartment, in other words, model-defined AWF.

Methods

MC simulations of random walkers and signal analysis were implemented in MATLAB (Version 2017b, MathWorks, Natick, MA, USA). Model is built as shown in Fig. 1. Intrinsic diffusivities ($$$D_{0,e}$$$ , $$$D_{0,i}$$$) were 2 and 1 $$$\mu m^2/ms$$$. Water exchange between intra- and extra-axonal compartment is given as $$$P_{ie}=4P/\sqrt{6D_i/dt}$$$ and $$$P_{ei}=4P_{ie}/\sqrt{D_i/D_e}$$$, where $$$P$$$ is membrane permeability. $$$P$$$ varied from 0.001 to 0.008 $$$cm/s$$$, with a step length of 0.001 $$$cm/s$$$. Other settings are described by Lin M et al 5.

Results

Top row of Fig.2 shows MK and AWF decrease as permeability increases and approach to constants at large membrane permeability, based on MC. Bottom row shows MK and AWF changes with diffusion time. When permeability is 0, MK and AWF do not vary with diffusion time, however, they vary when permeability is larger than 0 and approach to constants at large diffusion time. The simulation results are consistent with analytical solutions shown in Fig.3.
Fig. 3 shows changes of $$$h(\cdot )$$$ with membrane permeability and diffusion time, from analysis of (7) and related equations.

Discussion and Conclusion

Simulation results and analytical solutions show that membrane permeability has non-negligible effect on the dMRI metrics. And when membrane permeability is taken into account, diffusion time will also affect them. Furthermore, it should be noted that $$$h(\cdot)$$$ contains term of axonal volume fraction, which is the model-defined AWF, thus AWF derived from Eq. (6) is not a metric corresponding to axonal content as previously assumed 1. In this study, we highlight the effects of membrane permeability on WMTI-derived dMRI metrics, which should not be neglected.

Acknowledgements

This work was supported by the National Natural Science Foundation of China [grant numbers 91632109, 81871428, 81971184], the Shanghai Key Laboratory of Psychotic Disorders [grant number 13dz2260500], the Major Scientific Project of Zhejiang Lab [grant number 2018DG0ZX01], and the Fundamental Research Funds for the Central Universities [grant number 2019QNA5026].

References

1. Fieremans E, Jensen JH, Helpern JA, et al. White matter characterization with diffusion kurtosis imaging. Neuroimage. 2011;58(1):177-188.

2. Dula AN, Gochberg DF, Valentine HL, Valentine WM, Does MD, et al. Multiexponential T2, magnetization transfer, and quantitative histology in white matter tracts of rat spinal cord. Magn Reson Med. 2010;63(4):902-909.

3. Harkins KD, Dula AN, Does MD, et al. Effect of intercompartmental water exchange on the apparent myelin water fraction in multiexponential T2 measurements of rat spinal cord. Magn Reson Med. 2012;67(3):793-800.

4. Ning L, Nilsson M, Lasic S, Westin CF, Rathi Y, et al. Cumulant expansions for measuring water exchange using diffusion MRI. J Chem Phys. 2018;148(7):074109.

5. Lin M, He H, Tong Q, Ding Q, Yan X, Feiweier T, Zhong J, et al. Effect of myelin water exchange on DTI-derived parameters in diffusion MRI: Elucidation of TE dependence. Magn Reson Med. 2018;79(3):1650-1660.

Figures

Fig. 1 Model voxel containing intra-axonal and extra-axonal compartments. Equilibrium exchange of water exchange between the two compartments is considered.

Fig. 2 Results of mean kurtosis and axon water fraction relative to membrane permeability and diffusion time.

Fig. 3 Results of $$$h(\cdot )$$$ relative to membrane permeability and diffusion time.

Proc. Intl. Soc. Mag. Reson. Med. 28 (2020)
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