Zihan Zhou1, Qiuping Ding1, Hongjian He1, and Jianhui Zhong1,2
1Center for Brain Imaging Science and Technology, Key Laboratory for Biomedical Engineering of Ministry of Education, College of Biomedical Engineering and Instrumental Science, Zhejiang University, Hangzhou, China, 2School of Medicine and Dentistry, University of Rochester Medical Center, New York, NY, United States
Synopsis
White Matter Tract Integrity (WMTI) is a
biophysical model with specificity to underlying tissue microstructures.
However, recent work has suggested that inter-compartmental water exchange may affect
outcomes of the model metrics. In this work, we analytically relate the
WMTI-derived dMRI metrics to membrane permeability, and validate our predictions
using Monte Carlo simulations. Our results show that the water exchange has a
non-trivial effect on the metrics and needs to be carefully considered in WMTI.
Introduction
Water exchange is mostly ignored in the
models of quantitative diffusion, such as White Matter Tract Integrity (WMTI) 1.
However, recent studies have suggested that the water exchange still
significantly affects MRI measures of tissues ex vivo 2 and in vivo 3.
Here, we performed Monte Carlo (MC) simulations to investigate how water
exchange process contributes to the WMTI-based metrics, namely axon water
fraction (AWF) and mean kurtosis (MK).Theory
Based on biophysical reality, there are
three compartments, namely intra-axonal (i), myelin sheath (m),
and extra-axonal (e) compartments in the neuronal microenvironment. When
water exchange among different compartments is considered, they can be modeled
by a probabilistic change in the state of a molecule $$$s(t)$$$, which is described by a
probability vector $$$\boldsymbol{p}(t)=[p_{i}(t), p_{m}(t),p_{e}(t)]'$$$
with $$$p_{i,m,e}(t)$$$ being the probability of each compartment.
Owing to exchange, the probability distribution evolves as follows,$$\frac{\mathrm{d} \boldsymbol{p}(t)}{\mathrm{d} t}=K\boldsymbol{p}(t), (1)$$where the matrix $$$K$$$ is given by$$K: = \begin{bmatrix}-k_{im} &k_{mi} &0 \\ k_{im} &-k_{mi}-k_{me} &k_{em} \\ 0 &k_{me} &-k_{em} \end{bmatrix}, (2)$$ and $$$k_{im}$$$ and $$$k_{mi}$$$ are water exchange rates between intra-axonal compartment and
myelin while $$$k_{em}$$$ and $$$k_{em}$$$ are water
exchange rates between extra-axonal compartment and myelin. Given that signals
from myelin could not be detected as assumed in WMTI model 1, we simplified Eq. (2) to $$K: = \begin{bmatrix}-k_{ie} &k_{ei}\\ k_{ie} &-k_{ei}\end{bmatrix}, (3)$$ Then signal is given by$$\begin{bmatrix}\frac{\partial s_{i}}{\partial t}\\ \frac{\partial s_{e}}{\partial t}\end{bmatrix}=\begin{bmatrix}-q^{2}D_i-k_{ie} &k_{ei} \\ k_{ie} &-q^2D_i-k_{ei} \end{bmatrix}\begin{bmatrix}S_i(q,t)\\ S_e(q,t)\end{bmatrix}. (4)$$
For the kurtosis and AWF, we obtain,$${MP}_p(\cdot )={MK}_a(\cdot )\cdot h(\cdot ), (5)$$ $$AWF=\frac{K_{max_a}\cdot h(\cdot )}{K_{max_a}\cdot h(\cdot )+3}, (6)$$
where $$$MK_p(\cdot )$$$ is mean kurtosis value in presence of water exchange while $$$MK_a(\cdot )$$$ is mean kurtosis value in absence of water exchange, and $$$h(\cdot )$$$ is derived previously,4$$h(\cdot )=\frac{1}{k_{ie}\cdot \frac{1}{v_i}\cdot \Delta }-\frac{1}{{(k_{ie}\cdot \frac{1}{v_i}\cdot \Delta )}^{2}}+\frac{e^{-k_{ie}\cdot \frac{1}{v_i}\cdot \Delta }}{{(k_{ie}\cdot \frac{1}{v_i}\cdot \Delta )}^{2}}, (7)$$
where $$$k_{ie}$$$ is water exchange rate from intra- to
extra-axonal compartment, and $$$k_{ie}=P\cdot \frac{area}{volume}$$$, $$$v_i$$$ is the volume fraction of intra-axonal
compartment, in other words, model-defined AWF.Methods
MC simulations of random walkers and signal
analysis were implemented in MATLAB (Version 2017b, MathWorks, Natick, MA, USA).
Model is built as shown in Fig. 1. Intrinsic diffusivities ($$$D_{0,e}$$$ , $$$D_{0,i}$$$) were 2 and 1 $$$\mu m^2/ms$$$. Water exchange between intra- and
extra-axonal compartment is given as $$$P_{ie}=4P/\sqrt{6D_i/dt}$$$ and $$$P_{ei}=4P_{ie}/\sqrt{D_i/D_e}$$$, where $$$P$$$ is membrane permeability. $$$P$$$ varied from 0.001 to 0.008 $$$cm/s$$$, with a step length of 0.001 $$$cm/s$$$. Other settings are described by Lin M et al 5.Results
Top row of Fig.2 shows MK and AWF decrease
as permeability increases and approach to constants at large membrane
permeability, based on MC. Bottom row shows MK and AWF changes with diffusion
time. When permeability is 0, MK and AWF do not vary with diffusion time,
however, they vary when permeability is larger than 0 and approach to constants
at large diffusion time. The simulation results are consistent with analytical
solutions shown in Fig.3.
Fig. 3 shows
changes of $$$h(\cdot )$$$ with membrane permeability and diffusion time,
from analysis of (7) and related equations.Discussion and Conclusion
Simulation results and analytical solutions
show that membrane permeability has non-negligible effect on the dMRI metrics.
And when membrane permeability is taken into account, diffusion time will also
affect them. Furthermore, it should be noted that $$$h(\cdot)$$$ contains term of axonal volume fraction, which
is the model-defined AWF, thus AWF derived from Eq. (6) is not a metric
corresponding to axonal content as previously assumed 1. In this study,
we highlight the effects of membrane permeability on WMTI-derived dMRI
metrics, which should not be neglected.Acknowledgements
This work was
supported by the National Natural Science Foundation of China [grant numbers
91632109, 81871428, 81971184], the Shanghai Key Laboratory of Psychotic
Disorders [grant number 13dz2260500], the Major Scientific Project of Zhejiang
Lab [grant number 2018DG0ZX01], and the Fundamental Research Funds for the
Central Universities [grant number 2019QNA5026].References
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