Catherine A Spilling1, Franklyn A Howe1, and Thomas R Barrick1
1Neurosciences Research Centre, Molecular and Clinical Sciences Research Institute, St George's University of London, London, United Kingdom
Synopsis
Quasi-diffusion image (QDI) is a
new ultra-high b-value diffusion magnetic resonance imaging technique which provides
standard and non-Gaussian diffusion images. We use permutation analysis to optimise
a clinical QDI tensor acquisition from a gold standard multi b-value protocol
(28 non-zero b-values in 6 diffusion directions) to identify a 2 minute
acquisition protocol with excellent tissue contrast. We achieve this by
comparing different b-value combinations (2 non-zero b-values) to the gold
standard using χ2 difference in parameterised signal
decay curves. We obtain an optimal acquisition protocol of b=0, 1080, 5000 s mm-2
that may be acquired in a clinically acceptable time.
INTRODUCTION
Quasi-Diffusion Magnetic Resonance
Imaging (QDI) is a new ultra-high b-value diffusion magnetic resonance imaging
(dMRI) technique based on a special case of the Continuous Time Random Walk
(CTRW) model of diffusion dynamics1,2 which assumes the presence of non-Gaussian
diffusion properties within tissue microstructure. The QDI technique parameterises
the diffusion signal attenuation according to the rate of decay D1,2
(i.e. the diffusion coefficient in mm2s-1) and the shape
of the power law tail, $$$\alpha$$$. In particular, QDI provides conventional dMRI contrast,
and $$$\alpha$$$ maps which are analogous to the Diffusional Kurtosis Imaging (DKI) $$$\kappa$$$
measure3. A minimal tensor QDI acquisition requires a b=0 s mm-2
image followed by 2 non-zero b-value images in 6 diffusion gradient directions.
Here we optimise this minimal QDTI acquisition with respect to a ‘gold
standard’ to enable rapid acquisition of high tissue contrast QDI data within a
clinically feasible acquisition time of approximately 2 minutes.METHODS
MRI
acquisition
Whole-brain axial dMRI were
acquired on a 3T Philips Dual Achieva TX system using a single-shot diffusion
sensitised EPI sequence (TE=90ms, TR=6000ms, 1.5mm×1.5mm×5mm)
in 6 non-collinear diffusion gradient directions for 5 healthy individuals (age
22±4.5 years). The ‘gold standard’ involved acquisition of 28 diffusion-sensitised
images at equally spaced intervals from b = 180 to 5000 s mm-2 ($$$\delta$$$=23.5ms, $$$\Delta$$$=43.9ms) and 10 b=0 s mm-2 images. Images were acquired
twice to increase signal-to-noise in a total time of 35minutes 36seconds.
Image
analysis
Permutation analysis was performed for
each pair of non-zero b-values taken from the gold standard acquisition (n=387 permutations). The QDI model was fitted for the gold standard and each
b-value pair at each voxel to the following equation for signal, S, in each diffusion gradient
direction,
$$
S_{b}=S_{0}\sum_{k=0}^{\infty}\frac{(-1)^{k}(D_{1,2}b)^{\alpha k}}{\Gamma(\alpha k+1)}, [Eq.1]
$$
Model fitting was performed on
denoised4 dMRI data using the Levenberg-Marquadt algorithm and Padé
approximation to rapidly estimate Eq.1 and its derivatives5. The $$$\chi^2$$$ difference between the diffusion
signal decay curves for the gold-standard and each b-value permutation (across 28 b-values between 0 and 5000 s mm-2) were calculated at each voxel
and averaged across diffusion gradient directions. Grey and white matter voxels were identified at 95% tissue probability
from T1-weighted images6 (1mm3 voxel resolution) that
were aligned7 to the QDI data. Optimisation was performed
by minimising the median $$$\chi^2$$$ value of grey and white matter voxels. Tensor maps of D1,2 and $$$\alpha$$$ were
computed8 for the optimised and gold standard acquisitions from
which mean and anisotropy maps were calculated. Measurement accuracy for mean
and anisotropy D1,2 and $$$\alpha$$$ parameters was investigated in
grey and white matter using Bland-Altman plots and paired t-tests between the optimised
and gold standard acquisition.RESULTS
Figure
1 shows gold standard QDI model fits to representative grey and white matter voxels
and gold standard maps of D1,2 and $$$\alpha$$$ maps. The gold standard maps exhibit
excellent tissue contrast.
The optimisation results are shown in Figure 2a and indicate that the diffusion
signal decay curve for the b=0, 1080, 5000 s mm-2 combination most
closely matches the gold standard decay curve ($$$\chi^2$$$ = 0.030±0.007).
Optimised parameter maps provide excellent tissue contrast (Figure 2b) and are
visually similar to the gold standard data (Figure 1). Graphs of the difference
between signal decay curves for the gold standard and optimal b-value
combination for the representative grey and white matter voxels (Figure 2c)
show a maximum deviation from the gold standard of 2.00% in grey and 2.73% in
white matter. Bland-Altman plots (Figure 3) indicate that the optimal b-value
combination overestimates mean D1,2 (average difference = 0.016±0.011
x10-3 mm2s-1) and underestimates mean
$$$\alpha$$$ (average difference = -0.014±0.004) in white matter. D1,2
and $$$\alpha$$$ anisotropy were also overestimated in grey (average difference =
0.019±0.004 and 0.013±0.002, respectively) and white matter (average difference
= 0.043±0.011 and 0.018±0.003, respectively). Paired t-tests indicate that the
small differences between the optimal and gold standard QDI parameters are
significant (p<0.05) for mean D1,2
and $$$\alpha$$$ and in white matter and D1,2 and $$$\alpha$$$ anisotropy in grey and white matter.
Figures
4 & 5 shows mean and anisotropy QDI maps for optimised b-value pairs with
maximum b-values (bmax) of approximately 4000, 3000 and 2000 s mm-2
compared to the gold standard and optimal data. Tissue contrast visibly
deteriorates with reduction of maximum b-value as indicated by increases in $$$\chi^2$$$
($$$\chi^2$$$ = 0.034±0.011; 0.054±0.017; 0.127±0.032,
respectively).DISCUSSION AND CONCLUSION
We have
identified an optimal QDI acquisition that provides a short clinically feasible
protocol with excellent tissue contrast. The acquisition time of our optimal
QDTI is 3 minutes 24 seconds. As we acquired data twice to increase signal to
noise ratio, a shorter optimal acquisition could be acquired in approximately 2
minutes (i.e. 132 seconds), albeit with a loss in signal to noise ratio. This
could be further shortened to 96 seconds for a 3 orthogonal diffusion direction
acquisition. Our optimised acquisitions with lower maximum b-values could be
acquired on systems that have diffusion gradient limitations to provide good
tissue contrast for bmax≥4000 s mm-2 or calculated from
existing dMRI datasets. The short acquisition time identified by our optimal
QDTI protocol indicates that QDI may be added to routine conventional dMRI acquisition allowing simple translation to the clinical arena.Acknowledgements
Funding for this study was provided by a St George’s,
University of London Innovation Award.References
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