Morteza Esmaeili1,2, Jason Stockmann1, Bernhard Strasser1, Zhe Wang3, Lawrence Wald1, and Ovidiu C. Andronesi1
1Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States, 2Department of Diagnostic Imaging, Akershus University Hospital, Lørenskog, Norway, 3Siemens Medical Solutions, Charleston, MA, United States
Synopsis
An advanced local shimming technique can
substantially improve magnetic resonance spectroscopic imaging (MRSI) which
suffers from the inevitable local B0
inhomogeneities, particularly at ultra-high field. We evaluated the performance
on an ultra-high field 7T MRI system of a custom-designed 32-channel head coil
that with both RF-receive and DC-shim capability. Each coil loop simultaneously
and independently runs AC and DC currents for RF-receive and B0-shimming. We
examined the multi-coil shimming performance on five healthy volunteers using MRSI. The combined setup of DC-enabled local
shimming and highly-efficient spectroscopic acquisition resulted in a
noticeable improvement in the quality of spatial metabolic maps.
INTRODUCTION
Magnetic field (B0) inhomogeneity introduces noise/artifacts
in brain magnetic resonance spectroscopic imaging (MRSI) which grow significantly
worse at ultra-high fields. Most scanners are equipped with only second-order
spherical harmonics (2SH) shim coils which cannot homogenize the magnetic field
over the whole-brain within an acceptable range for MRSI performance. Multi-coil
shim arrays provide additional degrees of freedom to shape the B0 field
especially in brain regions close to air-tissue interfaces that are the most
affected by susceptibility anisotropy. Here we demonstrate that an integrated
32-channel RF-receive/B0-shim array ( “AC/DC” coil) improves the quality of
whole-brain MRSI at 7T ultra-high field.
METHODS
Data were
acquired with a 7T Magnetom MRI system (Siemens Healthcare, Erlangen, Germany).
We used recently-developed
multi-coil dynamic shimming hardware consisting of a 32-channel AC/DC coil
array patterned on a close-fitting 3D-printed helmet with shim currents driven
by a bank of digitally-programmable low-voltage amplifiers that allow very fast
switching in less than 1ms between different B0 field patterns (1,2).
3D MRSI data were
measured twice in five subjects with an IRB approved protocol using two
different shimming: 1) the standard 2SH shimming provided by the scanner
manufacturer, and ) the AC/DC shimming superimposed on the 2SH shimming.
The whole-brain 3D MRSI
sequence consisted of: 1) adiabatic spin echo (ASE (3)) with excitation pulse BIR-4 of ms/1kHz and refocusing
pulses GOIA-W(16,4) of 5ms/20kHz (duration/bandwidth); 2) fat suppression with
adiabatic inversion recovery using an asymmetric HGSB pulse (4) of 30ms and 270ms delay; 3) four-pulse
WET module (5) optimized for water suppression at 7T;
4) stack of novel spiral out-in (6) self-refocussing trajectories; 5)
volumetric EPI navigator which was interleaved each TR for motion correction
and shim update (7).
The following parameters were used
for acquiring MRSI: TR = 1800 ms; TE = 78 ms; FOV of 220×220×80 mm; matrix of 44×44×8;
nominal voxel size 5x5x10 mm; spectral window 2700 Hz; 24 angular interleaves,
2 temporal interleaves; 1 average;
acquisition time = 10:12 min:s. The ASE excited a brain slab of 60 mm-thickness
that contained six consecutive phase-encoded MRSI slices of 10 mm. For all MRSI
acquisitions, the specific absorption rate (SAR) was between 50%–85% of the
maximum SAR limit as monitored by the MRI system.
In addition to metabolite data, water
unsuppressed data (matrix of 22×22×8; acquisition time = 4:19 min:s) were
acquired for coil combination and phasing of metabolite spectra. The
raw MRSI data were reconstructed and analyzed with an in-house processing
package using Matlab R2018b (MathWorks, Natick, MA, USA), Bash V4.2.25 (Free
Software Foundation, Boston, MA, USA), MINC tools V2.0 (McConnell Brain Imaging
Center, Montreal, QC, Canada), and spectra fitting by LCModel V6.3 (LCMODEL
Inc, Oakville, Ontario, Canada, (8)). Non-Cartesian data were reconstructed
using a discrete Fourier transform, followed by removal of residual
lipid signal with L1 penalty (9) and spatial
Hamming filtering.
MR spectra were fitted
with LCModel between 1.8 and 4.2 ppm, with a basis-set of 17 brain metabolites. Linewidth less
than 0.1ppm and Cramer-Rao lower bounds (CRLB) less than 20% was determined for the
goodness of fit of the metabolites peaks.
RESULTS
AC/DC-shimming
is able to improve the spatial B0 homogeneity when superimposed on the 2SH as
can be seen in Figure 1A. In particular, the improvement is higher in the
inferior slices where it is notoriously difficult to obtain good quality data
in MRSI. The histograms of B0 values over the shimmed brain slab (Fig. 1B,C) is
narrower for the AC/DC shimming compared to the 2SH only shimming.
The metabolic
maps of tNAA, tCr, and tCho exhibit less spatial variability using AC/DC shim
compared to 2SH shim (Figs. 2 and 3). In particular, the signal loss in the
anterior parts of the brain is recovered with AC/DC shim. Example of spectra
from selected voxels in the anterior, center and posterior parts of the brain
show a clear improvement in linewidth and signal-to-noise ratio. Spatial
improvement in linewidth (FWHM), signal-to-noise ratio (SNR), and Cramer-Rao
lower bounds (CRLB) are visible across the brain in the corresponding maps. The
improvement in mean and standard deviation of these parameters across the whole
brain slab in all volunteers are listed in Table 1.
DISCUSSION
The results from metabolic maps demonstrated improved quality with less variability
and signal loss in MRSI acquired with AC/DC multi-coil shim compared to 2SH
standard scanner shimming routine. The high order AC/DC multi-coil shimming
provided a significant reduction of FWHM and increase of SNR which correspondingly
improved the goodness of fit and the accuracy of quantification across the
entire brain slab, and particularly important in the inferior brain slices that
are the most problematic for MRSI especially at ultra-high field. The real-time
motion and shim correction navigator added stability and robustness to the MRSI
measurement allowing extended acquisition times for high-resolution whole-brain
metabolic imaging at ultra-high field.
CONCLUSION
The AC/DC B0 shimming
technology makes whole-brain metabolic mapping feasible with 3D MRSI at 7T
ultra-high field. This results in improved data quality and quantification
accuracy, which has great potential for investigating brain neurochemistry in
healthy and disease conditions.Acknowledgements
This work was supported by
NIH/NCI
(1R01CA211080), the South-Eastern Norway Regional Health Authority (Helse Sør-Øst 2018047), and Austrian Science Fund (J 4110, P30701).References
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