Sebastian Flassbeck1, Fabian Kratzer1, Simon Schmidt1, Lisa Leroi2, Mark E. Ladd1, and Sebastian Schmitter1,2
1German Cancer Research Center (DKFZ), Heidelberg, Germany, 2Physikalisch-Technische Bundesanstalt (PTB), Braunschweig and Berlin, Germany
Synopsis
Flow-MRF
is a highly promising technique for rapid quantification of both relaxation times and time-resolved flow velocities. However, this method currently suffers
from two major drawbacks, firstly a low efficiency since multiple shots are used
and secondly strongly increased velocity noise for low velocities due to
magnetization preparation pulses. This abstract targets both issues by presenting
an optimized the flip angle (FA)-pattern for Flow-MRF, while assuming periodic
boundary conditions.
Purpose
Magnetic Resonance Fingerprinting1 (MRF) has emerged as a highly
promising technique for rapid multiparametric mapping in MRI. Besides the
quantification of relaxation times, other parameters have been shown to benefit
from an MRF-based quantification, among which is the quantification of flow
velocities2. This method, termed “Flow-MRF”, was shown to allow an approximately 2-fold
acquisition time reduction compared to conventional velocimetry while
simultaneously providing relaxometric maps of static tissues. However, this technique
currently suffers from two major drawbacks: firstly a low efficiency since
multiple shots are used
and secondly strongly increased velocity noise for low velocities due to
magnetization preparation pulses. This work targets both issues by presenting an optimized flip angle (FA)-pattern
for Flow-MRF while assuming periodic boundary conditions as recently proposed3. Background
Flow-MRF acquires multiple repetitions ('multi-shot') of the MRF
signal evolution while sampling different parts of k-space during each run. A
delay in the order of 8-10s, depending on relaxation times, follows each FA-train
repetition to allow the magnetization to approximately return to thermal equilibrium. While
this delay can be used to sample other slices to achieve a 100% scan efficiency
in multi-slice 2D MRF applications, this approach is unfeasible in 3D MRF or single-slice
applications, and scan efficiency decreases to approximately 50% (see Fig.1). Therefore,
continuously running MRF sequences have been proposed3, using periodic
or anti-periodic boundary conditions of the magnetization between beginning and
end of the FA-pattern3. Periodic boundary conditions seem particularly promising since they avoid the use of inversion preparation
pulses, which causes increased velocity noise in Flow-MRF2. Methods
The FA optimization employs recently proposed quality metrics4,
where both thermal and undersampling noise contributions are considered for parameter errors. The
contributions of both noise sources was weighted according to phantom results
obtained by a radial FISP sequence as described in [2] at 7T (Siemens, Germany).
The ratio between undersampling to thermal noise levels was a factor of 8. The
FA-pattern was optimized by minimizing the quality metrics to convergence with
a generalized pattern search algorithm (patternsearch, MATLAB, USA) initialized with white noise. The FA-pattern length was fixed to 1000 but only
25 supporting points, equidistantly distributed over the FA-pattern, are optimized
to reduce the dimensionally of the optimization problem. The remaining FAs are
calculated by
linear interpolation (see Fig.1). This optimization was performed for a
representative isochromat with T1=1500ms and T2=60ms.
The sequence timings for the optimization are based on the 2D Flow-MRF
sequence used in this work. Here, five radial shots were acquired per timeframe
with TE/TR of 5.9/9.86ms. The first gradient moment (m1) used to
encode velocities varied from -30 to 30mT/m$$$\cdot$$$ms2.
The influence of the proposed FA-pattern on velocity noise for low velocities
(<5cm/s) and static tissue is investigated in both simulations and a phantom
study. The simulations included spatial sampling and modeling of the fluid
motion with velocities from 0.07cm/s to 14m/s. In the phantom experiment, the velocity noise was quantified in the
static background and in flowing regions. Relaxation times were quantified in
an agarose-gel-based phantom consisting of 13 tubes filled with varying agarose
concentrations (0.75-2%) and doped with gadolinium-based contrast agent (0-0.1mmol/L).Results
The lack of waiting periods in the optimized pattern yields a 1.58-fold
increase in the readout efficiency as indicated in Fig.1. The first repetition
of the optimized pattern is discarded as the magnetization's evolution differs
from all other repetitions.
Simulation results (Fig.2) reflect a 4.3-fold reduction in velocity
noise for velocities below 0.1cm/s using the optimized FA-pattern. For velocities
>50cm/s, velocity noise increased from 0.3cm/s to 0.6cm/s. Note, that
only the two largest tubes of this phantom are connected to the flow pump as
seen in Fig.3b, while smaller tubes are filled with distilled water that was
static. The optimized pattern clearly
reduced the velocity noise in static tissue from 3.40cm/s to 1.86cm/s (see Fig. 3c-d). In particular, the
conventional FA-pattern fails to quantify velocities in the smaller tubes due
to the long T1 of the distilled water, indicated by the black arrows
in Fig.3c. Here, the mean velocity noise in these regions is 58.5cm/s. In flowing regions, a small velocity noise increase
from 1.09cm/s to 1.22cm/s in flowing regions is measured for the proposed
FA-pattern.
Fig.4 displays the relaxometric maps quantified by the optimized
FA-pattern in the relaxation phantom. Despite the lack of inversion preparation, T1
is well quantified based on the correlation to the reference. Nevertheless,
an increase in the mean standard deviation in T1 from 9.6ms for the
conventional FA-pattern to 32ms was observed. Despite showing a strong linear
correlation with the reference, T2 values are systematically
underestimated by 15.3% on average using the optimized pattern, which is not
observed for the conventional FA-pattern. Discussion
The optimization of FA-patterns for continuously running MRF sequences
with periodic boundary conditions holds large potential for improving velocity
quantification with Flow-MRF. These FA-patterns enable the possibility to
efficiently measure Flow-MRF in large 3D volumes while strongly reducing noise in slow-flowing regions. The T1 noise could potentially be
compensated by the higher
readout efficiency. The systematic bias in T2 is subject to further
investigations but might be related to an increased impact of magnetization
transfer (MT) on the optimized FA-pattern. Acknowledgements
No acknowledgement found.References
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