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Automated k-Space Trajectory Generation using Bayesian Reinforcement Learning for Quiet Single Shot Readout
Zhenliang Lin1, Qikang Li1, Lihong Tang1, Hui Huang1, Junwei Zhao1, and Jie Luo1
1Institute of Medical Imaging Technology, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China

Synopsis

Acoustic noise during MR scans generated by the gradient coil vibration has been compromising for patient comfort. Single-shot echo planar imaging (EPI), ubiquitously used in functional MRI and diffusion MRI acquisitions, has a rapid switching readout gradient, which is very efficient but also very loud. In this study, we employed a model free reinforcement-learning agent to optimize 2D single shot readout gradient waveforms toward the “reward” of lowering acoustic noise. The preliminary results show that the acoustic noise of the arbitrary trajectory is 17.2 dB lower than EPI for a 2D single slice readout.

Introduction

Acoustic noise during MR scans generated by the gradient coil vibration compromises patients’ comfort. Single-shot echo planar imaging (EPI), ubiquitously used in functional MRI and diffusion MRI acquisitions, has a rapid switching readout gradient, which is very efficient but also notoriously loud. Many attempts have been made toward a milder gradient waveform for EPI readout trajectory [1-3], which also benefit from the advances of fast imaging [2,3]. Meanwhile, careful choice of echo spacing according to the specific frequency response function (FRF) of a given scanner also helps noise reduction [4]. However the artificial design of sequence trajectory and parameter could not fully exploit the parameter space of k space filling to realize the full potential of noise reduction. In this study, we propose a framework to employ a model-free reinforcement learning agent to optimize pulse sequence parameters toward the “reward” of lower acoustic noise, under the constraint of appropriate k-space filling. Our preliminary results show that with the same scan time, the arbitrary trajectory produces acoustic noise 17.2 dB lower than EPI for a 2D single slice readout.

Methods

Reinforcement Learning Framework
An AI agent takes “actions” to generate readout gradient waveforms under imaging constraints, after the slice selective RF pulse to encode the time-evolution of the imaging samples’ nuclear magnetization. The gradient waveform interacts with its “environment” defined by the frequency response function (FRF) of a given scanner. The environment then produces rewards based on acoustic noise estimation that guide the refinement of the agent’s actions (Figure 1). Our Bayesian approach to model this system is composed of pulse sequence actions Ai = [ai(0), ..., ai(NT-1)] that are generated from a distribution p(A), in which i stands for the number of optimization iteration, and NT represents the number of time points. In order to effectively capture the dynamic interplay between action A and their physical effect on acoustic noise level, we modeled p(A) using a dependent Gaussian process with sparseness-inducing priors. The predicted acoustic noise score y is obtained using the experimentally obtained FRF and generated action A. The updated model posterior p(f|yi,Ai+1) proposes the next set of gradient waveform actions A* by maximizing an acquisition function ui(A), which is chosen to be the expected improvement.
Experiments
Experiments were performed on a 3T MR system (uMR790, United Imaging Healthcare, Shanghai). The sensor, an MR compatible condenser microphone (AWA 14423) was placed at the isocenter of the magnet bore. The frequency response function (FRF) of the scanner was obtained by applying the sweep-frequency sequence with gradient amplitude 3 mT/m and gradient switching frequency ramp from 20 Hz to 5000 Hz. Based on linear system assumption, the acoustic spectrum in the frequency domain S(f) can be estimated by S(f)=G(f) x H(f), where H(f) denotes the frequency response function, and G(f) for specific gradient waveform. And the predicted spectrum was then converted to the A-weighted sound pressure level SPA by an A-weighted filter. The acoustic noise score y was given by y= - SPA, as the guide for optimization. Single-shot EPI sequences with various bandwidth and imaging parameters were also applied to verify that the estimated acoustic noise accurately reflects actual noise.
Simulations:
We employed the simulation platform bloch-simulator-python [5] for bloch simulation. The trapezoidal EPI (Trap-EPI), sinusoidal EPI (Sin-EPI), spiral and AI designed gradient waveforms (Arb-K) were each converted as input to the simulation module, other inputs of the simulation were 1) a 2D brain image imported from MRiLab [6] with matrix size= 200 × 200, resolution = 1 mm; with fixed T1 and T2 for each tissue compartments, 2) imaging parameters: FOV 20 x 20 cm2, matrix size 128 x 128, flip angle = 90, TR = 400 ms; note that total readout time = 128 ms was fixed for different trajectories. Finally, image reconstruction was performed by solving the following optimization problem [7]: x = argmin Σ||FSix-di||2 +λ||Dx||1. Where F is the nonuniform fast Fourier transform (NUFFT) operator defined for specific sampling pattern [8], Si is the ith coil sensitivity map (total of 16 coils), di is the corresponding ith k-space data, D is the sparse transform (i.e. total variation), λ is the regularization term. And image quality was evaluated by PSNR, MSE and image similarity (SSIM) as compared with input image.

Results and Discussion

The schematic of gradient waveforms and their corresponding k-space trajectories are shown in Figure 2. As can be seen in Figure 3a, the acoustic frequency spectrum of the Arb-K has lower noise intensity as well as less high-frequency noise components. The acoustic noise estimated based on the measured scanner FRF is in very good agreement with the measured acoustic noise (Figure 3b). Table 1 summarizes the acoustic noise (dB) as well as the quality of the reconstructed images of all four sequences. The Arb-K trajectory reduces noise by 17.2 dB with slightly compromised image quality. Further work is needed to incorporate image quality into the reward loop of the reinforcement learning framework, which would likely better constrain the k-space filling pattern. To implement the sequence in realistic settings, potential challenges raised by gradient imperfections such as gradient delay, eddy current, as well as B0 field inhomogeneities need to be considered.

Acknowledgements

This work is supported in part by grants 2017YFC0109002 and 18YF1410900.

References

1. Schmitter S, Diesch E, Amann M, Kroll A, Moayer M, Schad LR. Silent echo-planar imaging for auditory FMRI. Magn Reson Mater Physics, Biol Med. 2008;21(5):317-325. doi:10.1007/s10334-008-0132-4 6.

2. Hutter J, Price AN, Cordero-Grande L, et al. Quiet echo planar imaging for functional and diffusion MRI. Magn Reson Med. 2018;79(3):1447-1459. doi:10.1002/mrm.26810

3. Zapp J, Schmitter S, Schad LR. Sinusoidal Echo-Planar Imaging With Parallel Acquisition Technique for Reduced Acoustic Noise in Auditory fMRI. J Magn Reson Imag. 2012;36:581–588.

4. Heismann B, Ott M, Grodzki D. Sequence-based acoustic noise reduction of clinical MRI scans. Magn Reson Med. 2015;73(3):1104-1109. doi:10.1002/mrm.2522.

5. http://www-mrsrl.stanford.edu/~brian/blochsim/ http://mrsrl.stanford.edu/~brian/bloch/

6. Liu F, Velikina J V, Block WF, Kijowski R, Samsonov AA. Fast Realistic MRI Simulations Based on Generalized Multi-Pool Exchange Tissue Model. IEEE Trans Med Imaging. 2017;36(2):527-537.

7. Feng L, Axel L, Chandarana H, et al. XD-GRASP: Golden-angle radial MRI with reconstruction of extra motion-state dimensions using compressed sensing. Magn Reson Med 2016;75:775-788.

8. Fessler JA, Sutton BP. Nonuniform Fast Fourier transforms using Min-Max interpolation. IEEE Trans Signal Process 2003;51:560–574.

Figures

Figure 1. The generation of arbitrary readout gradient waveform with reinforcement learning. An AI agent takes “Actions” to generate readout gradient waveforms under imaging constraints, after the slice selective RF pulse to encode the time-evolution of the imaging samples’ nuclear magnetization. The gradient waveform interacts with its “environment” defined by the frequency response function (FRF) of given scanner. The environment then produces rewards based on acoustic noise estimation that guide the refinement of the agent’s actions.

Figure 2. Schematics of four single-shot 2D imaging readout gradient waveforms, and their corresponding k-space trajectories.

Figure 3. a) The acoustic noise spectra of four single shot readout gradient waveforms. b) The measured noise and the estimated noise are in good agreement.

Figure 4. Reconstructed images corresponding to four different readout trajectories.

Table 1. Summary of acoustic noise level and image quality comparison of four different trajectories.

Proc. Intl. Soc. Mag. Reson. Med. 28 (2020)
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