Yichen Hu1, Qing Wei2, Zhongyang Zhou2, Jun Xie2, and Yongquan Ye1
1UIH America, Inc., Houston, TX, United States, 2United Imaging Healthcare, Shanghai, China
Synopsis
3D GRASE (GRAdient and Spin Echo) pulse sequence
has been widely employed as the readout in arterial spin labeling (ASL)
applications, given its efficient acquisition and relatively long lasting
signal intensities. However, the inherent weakness of GRASE, such as
vulnerability to motions, can induce ghosting artifacts to perfusion imaging
and quantitative cerebral blood perfusion (CBF) maps. Herein, we propose
applying the Multi-Dimensional Integration (MDI) algorithm to processing the
perfusion and CBF maps, by which method noticeable alleviation of motion
ghosting can be obtained, and the imaging noise is reduced as well.
Introduction
ASL is a useful technique mainly applied in
brain imaging for CBF measurement without using any exogenous contrast agent.1
Using 3D GRASE as the readout of ASL, ghosting along phase encoding
direction may be caused by motion during
the acquisition time. Specifically, multiple shots in phase encoding direction
are usually utilized in GRASE to acquire a 3D k-space volume. This usually leads
to inconsistent phases among shots due to motion, and consequentially ghosting
artifacts in imaging. The ghosting can be more undesirable in producing
perfusion weighted images and CBF maps, since both of them are generally in
relatively low SNR due to the nature of low ASL signals. The conventional
method of magnitude subtraction requires control and labeling images being
generated with a multi-channel combination algorithm (e.g. SOS), so that the
resulted image quality may not be optimal in the sense that the noise in such
low SNR images may vary spatially. In this work, we propose that these issues
can be overcome by using a convenient yet comprehensive strategy, namely Multi-Dimensional
Integration (MDI),2 in which the complex signal ratios of raw images
are extracted without a direct signal combination of channels and repetitions. Moreover,
because the ratios are independent of the control-labeling repetitions, the
data inconsistency between consecutive repetitions arising from motion becomes
lessened, leading to alleviation of ghosting artifacts.Methods
Considering the calculation for perfusion weighted images,
instead of directly subtracting channel combined magnitude images, the complex
ratio of control and labeling pairs for each channel and repetition is
calculated. Then the calculated complex ratios are summed up over all channels
and repetitions, and the magnitude of which gives an overall ratio (Rctrl/label). Consequently,
unity is subtracted from it, followed by multiplication by the magnitude of
labeling image. This rearranged subtraction protocol is expressed as equation 1
below:
$$\left[\mid\sum_{ch=1}^M\sum_{rep=1}^N\left(\frac{S_{ctrl}\left(ch,rep\right)}{S_{label}\left(ch,rep\right)}\right)\mid-1\right]\cdot M_{label}\tag{1}$$
where Sctrl
and Slabel are the complex
images from control and labeling acquisitions respectively; Mlabel is the magnitude of labeling
image; ch and rep denote the channel index and repetition index, respectively;
and M and N represent total numbers of channels of head coil and repetitions,
respectively. Similarly, CBF is calculated as follows in equation 2:
$$\left[\mid\sum_{ch=1}^M\sum_{rep=1}^N\left(\frac{S_{ctrl}\left(ch,rep\right)}{S_{label}\left(ch,rep\right)}\right)\mid-1\right]\cdot \mid\sum_{ch=1}^M\left(\frac{\sum_{rep=1}^NS_{label}\left(ch,rep\right)}{S_{M_{0}}\left(ch\right)}\right)\mid\cdot\lambda\tag{2}$$
where $$$S_{M_{0}}$$$ is the complex proton density weighted image (M0) and λ signifies
the coefficient containing all required parameters for CBF calculation suggested by the ASL
consensus.1 $$$S_{M_{0}}$$$ is independent of repetition number as it is acquired only once in an ASL scan
protocol. In this equation, two complex ratios are calculated and no magnitude
images are required.
For demonstration, ASL experiment was performed with a
healthy volunteer at 3.0 T using a uMR 780 scanner (United Imaging Healthcare, Shanghai,
China) equipped with a 24-channel head coil. A 3D variable-flip-angle based
GRASE sequence was employed for data acquisition. TR/TE = 4643/13.8 ms. An
acquisition matrix of 64×64 was applied. 32 slices with thickness of 4 mm were
collected with 10% slice oversampling. The ASL labeling duration was set to
1800 ms followed by 1800 ms post-labeling delay.Results
Figure 1 shows the perfusion images based on (a)
SOS magnitude subtraction and (b) MDI for 8 slices from the ASL experiment. It is evident that the overall noise
level of images by MDI method in Fig. 1(b) is suppressed compared with images
based on SOS algorithm. Meanwhile, the promiscuous signal outside of brain
tissue in Fig. 1(a), which can be partially attributed to motion ghosting, is largely
reduced with MDI as exhibited in Fig. 1(b).
Figure 2 (a, b) demonstrates the CBF maps with (a) the SOS
method in comparison with using (b) MDI from the same experiment. Because the CBF
maps in Fig 2(a) and (b) are masked based on image registration algorithm, the
background noise and ghosting are not considered for comparison. The difference
between the two methods are shown in Figure 2(c). The most evident difference
indicated by the hollow arrows, is the ghosting artifacts associated with eye
ball movements. Besides, the difference images do not generally exhibit a
pattern corresponding to brain anatomy or perfusion contrast, thus should bear
a large contribution of noise. Similarly to the perfusion images in Fig. 1, this
noise in CBF images shown in Fig. 2(b) is reduced with MDI.Discussion and Conclusion
The pivot of MDI is that the irrelevant dimensions with any
interested quantity are operated individually in the quantity mapping. Without
directly combining these dimensions, noise distribution is not modified and no
mapping bias is introduced, especially for maps with low signal to noise ratio.
The signal ratios are usually employed for removal of the irrelevant
dependence. As for ASL, the channel and repetition are irrelevant dimensions for
perfusion mapping. Taking advantage of MDI, the relevance is thus eliminated while
calculating the complex ratios, through which optimal noise distribution can be
achieved. The additional benefit with this strategy is that the data
inconsistency due to motion is mitigated. Both the perfusion and CBF maps show
reduction of noise and ghosting artifacts in the axial slices. Taken as a
whole, this MDI scheme applied in ASL presents a reliable practice and gives
insights into obtaining perfusion mapping with greater accuracy in clinical
examinations and studies.Acknowledgements
No acknowledgement found.References
1.
Alsop, David C., et al. "Recommended implementation of arterial spinālabeled perfusion MRI for clinical applications:
A consensus of the ISMRM perfusion study group and the European consortium for
ASL in dementia." Magnetic resonance in medicine 73.1 (2015): 102-116.
2. Ye, Yongquan, et al. "MR
Relaxivity Mapping using multi-dimensional integrated (MDI) complex signal
ratio." ISMRM 27th Annual Meeting & Exhibition, Montreal,
QC, Canada; 2019, p 4392.