Jan-Rüdiger Schüre1, Manoj Shrestha2, Eike Steidl3, Ralf Deichmann2, Elke Hattingen3, Marlies Wagner3, and Ulrich Pilatus3
1Neuroradiology, Goethe University Hospital, Frankfurt am Main, Germany, 2Brain Imaging Center (BIC), Frankfurt am Main, Germany, 3Goethe University Hospital, Frankfurt am Main, Germany
Synopsis
We present a fast 2D EPI multislice sequence
that allows to acquire the APT-CEST contrast in 16 slices within 8 seconds. The
fast CEST-EPI sequence was compared in vitro and in vivo with a steady-state
CEST sequence, where the saturation is applied for 4 s for each frequency
offset. The reduced acquisition time in the fast sequence can be used for measurement
repetitions or additional MR examinations (e.g. MR spectroscopic imaging).
Introduction
The APT-CEST contrast has been shown to
provide important information for diagnosis and monitoring of human brain
tumors1,2,3. For most clinical applications, coverage of the
entire tumor volume is required. Here, we present a 2D EPI multislice APT-CEST
sequence, which allows acquiring 16 slices within 8 seconds for each frequency offset. The
sequence was validated for different T1 in a phantom study and then applied in
vivo, examining 10 patients with brain tumor. For additional metabolic
information, 31P and 1H MR spectroscopic imaging was applied and registered with
the APT-CEST contrast images, to explore physiological changes in tumor environment.Methods
Data were acquired with a 3T whole-body
MRI scanner (MAGNETOM Prisma, Siemens Healthineers, Erlangen, Germany). While spectroscopic
data were acquired with a double tuned 1H/31P head coil, a 20 channel array
head coil was used for APT-CEST imaging.
The steady-state CEST-EPI (SS-CEST-EPI)
sequence is shown in figure 1a. It contains
a primary saturation module, consisting of a rectangular saturation pulse at a
defined offset, followed by fat suppression (FS) and two spoiler gradients (S1,
S2) for destroying the residual transversal magnetization. The steady-state, regarding
the saturation transfer and direct water saturation, is achieved by repeating
the module Ndummy times. The second module is an EPI readout of the
longitudinal magnetization for a specific slice. This module is repeated for each
slice until the total volume is covered. Steady-State conditions are maintained via a saturation pulse before EPI readout. Upon switching the frequency offset,
the preparation module is applied again to achieve the new steady state before acquiring
the image. For the proposed fast CEST EPI sequence (figure 1b) the primary
module is applied only in the beginning, assuming a fast adaption of the steady
state at the new frequency offset with only one saturation pulse.
Both protocols were tested using a phantom
with 3 tubes containing gelatin (for APT-CEST) in Phosphate Buffered Saline
(PBS) at a pH-value of 7.0. Different T1 relaxation times (450 ms, 820 ms,
1300ms) were adjusted by the addition of contrast agent. As the pH might slightly
change upon addition of contrast agent and during gelation, we used the shift
of inorganic phosphate in 31P-MRS to control the final pH. The Z-spectra were
scanned from -8 to +8 ppm with a step width of 0.25 ppm at an irradiation
strength of B1=1µT and a pulse length of δ=250ms with Ndummy=8, covering a
slab of 40 mm with 8 slices. Parametric maps for MTRasym4
and AREX5 were calculated.
Finally, APT-CEST contrasts were studied in 10 patients recording
16 slices covering 80 mm. Employing both
presented CEST-EPI sequences, parametric images from the entire brain tumor
were obtained and compared to pH-values obtained by 3D 31P-MRSI. In addition, we
also collected 2D 1H-MRSI data (single slice at the level of the center of the
tumor). Results
Figure 2 shows a ROI based B0 corrected Z-spectrum
of the 3 tubes with different T1 relaxation times over all 8 slices. No
differences between the SS-CEST EPI and the fast CEST-EPI data were found.
Parametric maps for MTRasym and
AREX across 8 slices are shown in figure 3. Both sequences lead to almost identical
results. As expected, MTRasym reflects the differences in T1 relaxation
time between the 3 tubes (ΔMTRasym≈0.04), whereas for the T1 compensated AREX
contrast only slight differences were observed (ΔAREX≈0.02), which may be
attributed to pH (Fig4).
Figure 5 presents results from an
examination of a tumor patient, applying the SS CEST-EPI and fast CEST-EPI
sequences, as well as 31P-MRSI and 1H-MRSI. Both CEST datasets show a similar
contrast with increased values in the center of the tumor in MTRasym
and Lorentzian difference analysis (LDA6) at 3.5ppm. As expected for
tumor tissue, 2D 1H-MRS shows an increased ratio between the signals of
choline and NAA. The investigation by 31P-MRS enables a pH analysis of the
whole tumor volume. Areas of increased pH partly correspond to hyperintense areas in MTRasym and LDA data.Discussion
The in vitro results indicate that, in the acquisition scheme described in figure 1, one CEST preparation pulse is
sufficient for establishing the new equilibrium after switching the frequency offset
by less than 0.25 ppm. Furthermore, there seems to be no alterations at longer
relaxation times (up to 1300 ms) for APT-CEST imaging, although the spin system
is not fully relaxed (Fig.2). Both sequences were tested in vivo, acquiring APT-CEST
data from a tumor patient with 2 measurement repetitions in the spectral range
of the aliphatic and amide protons, leading to a total scan time of 14 min with
fast CEST-EPI and 22min with SS CEST-EPI. Increased intracellular pH and APT-CEST
contrasts appear to be not identical in all slices, indicating the effect of
other parameters on the APT-CEST contrast.
Data acquisition
with fast CEST-EPI leaves sufficient time for acquiring MRSI data. This setup allows
for a thorough examination of the tumor environment, exploring the physiological changes
related to CEST contrast.Conclusion
The fast CEST-EPI sequence presented here
allows for a rapid data acquisition. This enables additional time savings in
clinical research for measurement repetitions and the acquisition of
spectroscopic data.Acknowledgements
No acknowledgement found.References
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