Yasmin Mzayek1,2, Francesca Branzoli3, Thomas Troalen4, Yann Le Fur1,2, Patrick Viout1,2, Tangi Roussel1,2, Stanislas Rapacchi1,2, Maxime Guye1,2, Itamar Ronen5, Wafaa ZAARAOUI1,2, and Jean-Philippe RANJEVA1,2
1Aix-Marseille Université, CNRS, CRMBM, Marseille, France, 2APHM, Hôpital de la Timone, Pôle d’Imagerie Médicale, CEMEREM, Marseille, France, 3Brain and Spine Institute - ICM, Centre for NeuroImaging Research - CENIR, Paris, France, 4Siemens Healthineers SAS, Saint-Denis, France, 5Department of Radiology Leiden University Medical Center, Leiden, Netherlands
Synopsis
We implemented a
diffusion-weighted semi-LASER single voxel spectroscopy sequence with
no water suppression to measure mean diffusivity and fractional
anisotropy within two volumes-of-interest in the corpus callosum.
Without water suppression, we were able to decrease acquisition time
and use the water signal for phase, frequency, and eddy current
corrections. We measured the signal decay of N-acetylaspartate
(tNAA), creatine (tCr), choline (tCho), and water to derive diffusion
outcomes and compare between the two volumes-of-interest. Our
implementation was done in feasible time for in vivo measurements.
Further development can lead to more specific assessments of brain
microstructure and pathophysiology.
Introduction
Diffusion-weighted
1H magnetic resonance spectroscopy (DW-MRS) is a
noninvasive tool that measures diffusion properties of metabolites in
addition to water protons. Since these metabolites are predominantly
intracellular and cell-type specific, DW-MRS can lead to better, more
specific characterizations of brain microstructure and physiology1.
This technique suffers from a lack of sensitivity due to low
signal-to-noise ratio (SNR) observed in spectroscopy. The use of
ultra-high field MRI scanners (>= 7T) offers increased SNR but
requires adapted sequences such as localization by adiabatic
selective refocusing (LASER) or its variant semi-LASER, enabling
better localization and better immunity to B1 inhomogeneities and
cross-terms2. In this study, we implemented a DW
semi-LASER single-voxel spectroscopy sequence while considering
energy limitations. Therefore, we chose to not use water suppression
(WS) to decrease acquisition time (limited by SAR restrictions) and
benefit from the water signal for phase, frequency, and eddy current
corrections. We tested the sensitivity of this approach in five
healthy volunteers in 2 different regions of the corpus callosum
(CC), the splenium (sCC) and the posterior body (pBCC), known to have
different diffusion properties. The development and optimization of
this technique at 7T aims at increasing the potential of DW-MRS to
probe microstructural features of brain tissue.Methods
A semi-LASER
sequence with bipolar diffusion gradients (Fig. 1) was implemented at
7T (Magnetom step 2, Siemens) using a 32-channel head coil (Nova) on
5 healthy volunteers (median age=27 (21-34), 2 females and 3 males).
For each participant, measurements were performed within two volumes-of-interest (VOIs) (the sCC and the pBCC) (Fig. 2). The parameters of
the DW semi-LASER sequence were the following: TE=135ms, TR=3-3.6s,
pulse trigger with delay of 230ms, 32 repetitions, and acquisition
time of 12-15 minutes. For diffusion sensitization, 2 b values (0 and
3000 s/mm2) with 6 directions of gradients
(110,011,101,1-10,-101,01-1) were used. The VOI size was 1.5x1.5x1.2
cm3 in the sCC and 0.9x3.0x1.6 cm3 in the pBCC.
No WS was used during the acquisition to allow shorter TR within SAR
limits, thus decreasing scan time. During post-processing, we applied
FID modulus3 to control for distortions such as sidebands
created by the water signal. FID modulus calculates the
modulus of the signal to correct for phase and frequency shift and
eddy currents. We then combined the signals from each channel and
averaged them across repetitions. HLSVD4 was used to
remove the water signal before spectral fitting. We compared the SNR
of the spectra between 4 different phase and frequency error
correction methods: FID modulus, first point of the FID, AMARES, and
HLSVD. Spectral quantitation for N-acetylaspartate (tNAA), creatine
(tCr), choline (tCho), and water was performed using AMARES5.
Fittings of diffusion decays of metabolites were conducted using
simple linear regression, before computing mean diffusivity (MD) and
fractional anisotropy (FA) for the two VOIs. For each metabolite, MD
and FA were compared between the two VOIs using a Wilcoxon rank test.Results
The bipolar
diffusion gradients in our sequence are commonly used to compensate
for eddy-currents6. With the semi-LASER localization
scheme, we addressed several common challenges associated with DW-MRS
at ultra-high magnetic field including B1 inhomogeneities,
cross-terms, and motion artifacts. In a phantom, we compared the use
of non-WS data and WS with a reference non-WS scan and found similar
SNR in the corrected spectra (p=0.08). Fig. 2 shows the
diffusion-weighted spectra of one participant. The decrease in peak
amplitude for tNAA, tCr and tCho is shown between b=0 and the maximum
b value of 3000 s/mm². In Fig. 3, we compare the SNR between FID
modulus and 3 other correction methods. FID modulus has a higher mean
and smaller standard deviation compared to the other methods. The
group averaged data for MD and FA are shown in Fig. 4. Interestingly,
MD was higher in the sCC compared to the pBCC for tNAA (p=0.009) and
for tCr (p=0.009), while the MD of tCho and water was equivalent
between the two VOIs. In contrast, the FA values of metabolites and
water appeared equivalent between the two structures.Discussion
The DW-semi-LASER
sequence was implemented in feasible time for in vivo exploration and
allowed for quantification of the signal attenuation of tNAA, tCr,
tCho, and water. We did not use WS in our acquisition in order to use
the water signal to correct for phase and frequency shift as well as
save time during the acquisition. The use of non-WS data has been
shown to bias diffusion outcomes7, however we were able to
compensate for this bias by using FID modulus in the post-processing
stage. This correction method was shown to bias the water signal by
amplifying it, but to have little effect on the metabolite signals.
We found that the mean MD and FA for tNAA, tCho, and tCr in the two
voxels of the CC are within the range reported in the literature8-11.
Also, as has been reported, the FA for the metabolites is higher than
the FA for water because they are generally more confined to the
intracellular environment than water molecules.Conclusion
Further development
and optimization of this technique can lead to assessments of early
biomarkers of neurodegeneration and astroglial activation.Acknowledgements
Neuroschool PHD program at Aix-Marseille UniversityReferences
1.Palombo, M.,
Shemesh, N., Ronen, I., & Valette, J. (2018). Insights into brain
microstructure from in vivo DW-MRS. NeuroImage,
182, 97–116.
2.
Valette, J., Giraudeau, C., Marchadour, C., Djemai, B., Geffroy, F.,
Ghaly, M. A., … Lethimonnier, F. (2012). A new sequence for
single-shot diffusion-weighted NMR spectroscopy by the trace of the
diffusion tensor. Magnetic Resonance in Medicine, 68(6), 1705–1712.
3. Le Fur, Y., &
Cozzone, P. J. (2014). FID modulus: a simple and efficient technique
to phase and align MR spectra. Magma (New York,
N.Y.), 27(2), 131–148.
4.
Pijnappel, W. W. F., van den Boogaart, A., de Beer, R., & van
Ormondt, D. (1992). SVD-based
quantification of magnetic resonance signals. Journal of Magnetic
Resonance (1969), 97(1), 122–134.
5.
Vanhamme,
null, van den Boogaart A, null, & Van Huffel S, null. (1997).
Improved method for accurate and efficient quantification of MRS data
with use of prior knowledge. Journal of Magnetic Resonance (San
Diego, Calif.: 1997), 129(1), 35–43.
6.
Branzoli, F., Ercan, E., Webb, A., & Ronen, I. (2014). The
interaction between apparent diffusion coefficients and transverse
relaxation rates of human brain metabolites and water studied by
diffusion-weighted spectroscopy at 7 T. NMR in Biomedicine, 27(5),
495–506.
7.
Döring, A., Adalid, V., Boesch, C., & Kreis, R. (2018).
Diffusion-weighted
magnetic resonance spectroscopy boosted by simultaneously acquired
water reference signals. Magnetic Resonance in Medicine, 80(6),
2326–2338.
8. Branzoli, F.,
Ercan, E., Valabrègue, R., Wood, E. T., Buijs, M., Webb, A., &
Ronen, I. (2016). Differentiating between axonal damage and
demyelination in healthy aging by combining diffusion-tensor imaging
and diffusion-weighted spectroscopy in the human corpus callosum at
7T. Neurobiology of Aging, 47, 210–217.
9.
Ronen, I., Ercan, E., & Webb, A. (2013). Axonal and glial
microstructural information obtained with diffusion-weighted magnetic
resonance spectroscopy at 7T. Frontiers in Integrative Neuroscience,
7.
10. Ellegood, J.,
Hanstock, C. C., & Beaulieu, C. (2010). Considerations for
measuring the fractional anisotropy of metabolites with diffusion
tensor spectroscopy. NMR in Biomedicine, 24(3), 270–280.
11. Wood, E. T.,
Ronen, I., Techawiboonwong, A., Jones, C. K., Barker, P. B.,
Calabresi, P., … Reich, D. S. (2012). Investigating axonal damage
in multiple sclerosis by diffusion tensor spectroscopy. The Journal
of Neuroscience: The Official Journal of the Society for
Neuroscience, 32(19), 6665–6669.