Malte Roehl1,2, Peter Gatehouse1,2, Pedro Ferreira1,2, Sonia Nielles-Vallespin1,2, Sonya Babu-Narayan1,2, Margarita Gorodezky1,2, Hui Xue3, Peter Kellman3, Dudley Pennell1,2, David Firmin1,2, and Andrew Scott1,2
1Imperial College London, London, United Kingdom, 2Royal Brompton Hospital, London, United Kingdom, 3NIH, Bethesda, MD, United States
Synopsis
In regions of short T2*decay during
long spiral k-space covering readouts can cause significant image blurring. In
this work we introduce a novel correction for spatially varying T2* including a
stimulated echo-based spiral T2* mapping sequence and compare it to an existing
correction for constant T2*. Using both computational simulations and in-vivo spiral
cardiac diffusion tensor data we show that the spatially varying correction
improves the sharpness compared to the constant correction.
Introduction
While rapid k-space coverage techniques such as EPI and Spiral have become
popular tools in MR, little has been done to address the image blurring caused
by T2* signal decay during the readout. This is particularly troublesome in
applications with long readouts and low T2* values, such as, but not
exclusively, diffusion tensor cardiovascular magnetic resonance (DT-CMR). We
previously implemented a method that corrects spiral DT-CMR images assuming a constant
myocardial T2* 1. Here, we extend this work to account for the known
spatial variations in T2* within the myocardium and we also show a novel
stimulated echo-based spiral T2* mapping method with B0 correction. The methods
are first tested in simulations and then in-vivo data.Methods
Spatially
uniform and varying T2* corrections were initially evaluated using a synthetic
single-short axis slice cardiac DT-CMR dataset (b-values 150smm-2
and 600smm-2, 6 directions, mean b0 SNR=27). Simulated T2* varied linearly
around the circumference and a 2mm thick region of simulated pathology was
included, circumferentially spiralling from epi to endocardium.
Spiral
cardiac DT-CMR dataset was acquired in 6 healthy volunteers (age 27-64, 2
female,4 male) for a short axis slice. T2* mapping data was acquired with a Stimulated
Echo Acquisition Mode (STEAM) prepared method with a spiral trajectory. The T2*
mapping sequence was acquired in one breath hold, of 22 cardiac cycles. Two cardiac cycles were required for each
stimulated echo and one stimulated echo was used for the coil sensitivity maps,
two for the field (B0) maps and eight for the T2* mapping data. T2* mapping used 8 ∆TE (time from the
stimulated echo to the beginning of the spiral) linearly varying from 0 ms to
16 ms. Spiral STEAM DT-CMR data were then acquired at b=150smm-2 with
6 directions. Both T2* mapping data and DT-CMR were acquired with a reduced field
of view using in-plane slice selective RF pulse, 2.8x2.8x8mm3 acquired
spatial resolution, 90x90mm2 spiral readout field of view, spiral
duration 14.9ms. All data were acquired on a Vida XT 3T system (Siemens Healthineers
Erlangen).
T2*
maps were calculated before and after a frequency segmented B0 correction2
of the raw T2* images.
Based
on the frequency segmented reconstruction2 the novel spatially
varying T2* correction is shown in Figure 1. Reconstructed with 40 different
uniform T2* corrections a set of images was created by standard gridding
operations. The final image was then obtained by pixelwise selection of the
data corresponding to the T2* value in the T2* map.
The
data were reconstructed using a custom Gadgetron3 based online
reconstruction, that reconstructed in 16s (spatially varying correction, Intel
i9-7940X CPU, 32GB RAM).
Image
sharpness was assessed in a region of the left ventricular septal endocardial
border using the edge sharpness fitting described previously4. Diffusion weighted images were compared
without T2* correction, with uniform T2* correction (using mean myocardial T2*)
and with spatially varying T2* correction both with and without off-resonance
correction of the T2* data.Results
Figure
2 shows the DT-CMR maps from the simulations and the different corrections. While
T2* related blurring in the region of simulated pathology is improved in the
constant correction it is lowest when using the spatially varying correction.
The
T2* maps and associated B0 maps for each subject are shown in Figure 3. T2*
maps are shown with and without off-resonance correction. These T2* maps were
then used to correct the results shown in Figure 4. Spatially varying T2*
correction results in visually sharper images at the expense of some spurious
pixel values in the image background and myocardial borders. Figure 5 shows the sharpness measures for
each of the T2* correction methods. The spatially varying T2* correction without
off-resonance correction of the T2* maps yield the highest sharpness values.Discussion
We have shown that it is possible with our novel method to correct for
spatially varying T2* related blurring in spiral images. The images corrected
with our novel method demonstrate improvement in sharpness measures over the images
corrected with a constant T2* value and uncorrected images. However, visually there
are errors in some pixels after correction, particularly at the myocardial
borders. This noise enhancement is due to low measured T2* values and
background noise and might be reduced through regularization methods, such as 5,
applied to the T2* map calculation. We did not apply off-resonance correction
to the imaging data, as joint T2* and B0 correction is computationally challenging
but is expected to improve our image quality. This improvement in sharpness
will be important as spatial resolution is improved and applied in challenging
anatomy and patient cohorts, including the right ventricle. While we have
chosen to demonstrate the improvement in sharpness in DT-CMR data, the T2*
correction method may be of use in other applications using spiral trajectories
or other long readouts.Conclusion
Non uniform T2*
causes spatially varying image blurring in methods with long readouts such as spiral
DTCMR. For the first time, we show that this blurring can be corrected based on
T2* maps.Acknowledgements
References
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