Qing Ji1, Matthew Scoggins1, Angela Edwards1, John O. Glass1, Tara Brinkman2,3, Zoltan Patay1, and Wilburn E. Reddick1
1Diagnostic Imaging, St.Jude Children's Research Hospital, Memphis, TN, United States, 2Psychology, St.Jude Children's Research Hospital, Memphis, TN, United States, 3Epidemiology and Cancer Control, St.Jude Children's Research Hospital, Memphis, TN, United States
Synopsis
A CTC fiber pathway template was built in MNI
space from the CTC data of 10 healthy controls. The template was aligned with
the principle diffusion directions of each individual DTI data of additional 10
healthy controls and 11 post-surgical medulloblastoma patients using a linear
algorithm developed in this study. The aligned template can accurately mimic the
real CTC pathways in an individual subject in both healthy and post-surgical
subjects. The DTI parameter values in post-surgical medulloblastoma patients can
be accessed using the transformed CTC pathway.
INTRODUCTION
CTC pathway is an important neural fiber tract
that connects cerebellum with contralateral frontal cortex. The CTC damage due
to surgery for mid-line intravascular tumor in posterior fossa can result in
different degrees of tremor, ataxia and cerebellar cognitive affective
syndromes (CCAS) such as seen in cerebellar mutism syndrome. A quantitative
measure of evaluation for the CTC pathways in postoperative patients is
necessary to understand the relationship between CTC damage and post-surgical
CCAS. Diffusion tensor tractography (DTT) provides a possibility to identify the
CTC, but can fail in native space if there is loss of diffusion information along
the CTC path due to surgical damage. In this study, we proposed an alternative approach
using a CTC pathway template from healthy subjects to access the damaged CTC in
patients.METHOD AND MATERIALS
MR scans of 11 childhood medulloblastoma
patients (age at exam 12.2±3.2 years) and 20 healthy controls (age 21±5.7
years) were used. Each MR scan consisted of an anatomic 3D T1
weighted image data set and a DTI data set (64 directions, 2 average, b=1500).
For each subject, the left and right CTC pathways were extracted using the
probabilistic fiber tracking scheme described in our previous study1.
The CTCs of 10 healthy subjects were then used to build a CTC template. As shown
in Figure 1, the CTC streamlines from 10 healthy subjects were first affine
registered to MNI space. One registered CTC was chosen as a target template,
and the rest of the CTCs were aligned with the target template using a bundle to
bundle registration algorithm 2 which was implemented in DIPY (http://dipy.org). The final CTC template consists of 20,000
streamlines (10,000 on each side) with each subject contributing at least 10%
to the final template. To align the template with an individual subject, we proposed
a method that aligned the streamlines in the template with the native principle
diffusion directions. The native principle diffusion direction V1 and
fractional anisotropy (FA) images were first obtained using the DTIFit software
in FMRIB Toolbox (http://fsl.fmrib.ox.ac.uk
). Affine registration of the MNI template with the native FA was then performed
to transform the template to native DTI space. At this stage, the template was not
always aligned well in the native space. A cost function to align the streamlines in
the template with the native principle diffusion directions (V1) were
proposed as illustrated in Figure 2. The template can be aligned in the native
space by maximizing this cost function through rotation and translation of the
template in native space. To validate this method, the CTC data of 10 additional
healthy subjects and 11 post-surgical medulloblastoma subjects in native space were
used.
RESULTS
The bilateral CTCs of 20 heathy subjects were
successfully obtained in native space. Expectedly, among 11 patient subjects,
the bilateral CTCs could be tracked in only 5 subjects, left CTC could be
tracked in an additional 4 subjects and neither left nor right CTCs could be
tracked in 2 subjects. The CTC template was transformed into the native space
for each subject. The bottom part of Figure 2 demonstrates the effect of aligning
the streamlines of the template with the native principle diffusion directions
by maximizing the cost function in native space. The aligned template on each
subject was compared with the tracts natively obtained. Figure 3 demonstrates visual
comparison of aligned templates with natively tracked CTCs of a healthy subject
and a patient. The streamlines in the locally tracked CTC fiber bundle were not
exactly the same as the streamlines in the aligned template, but provided a
good approximation of the locally tracked bundles. Figure 4 illustrates the streamlines
of the aligned template in a patient subject. It connected with dentate nuclei,
superior cerebellar peduncles, contralateral red nucleus, thalamus and internal
cuspules. With the template aligned in native space, the quantitative
evaluation of the CTC can be performed on the aligned template using locally
acquired DTI parameters. Figure 5 shows the FA distributions along the CTC
pathways of 12 subjects (1 normal and 11 patients). For those 11 patient
subjects, the CTC damage primarily occurred on the right CTC tracts. Since FA
is an important parameter for the neural fiber integrity, the degree of the CTC
damage can be quantitative evaluated on the FA statistics of the CTC tracts. An
advantage of using one template for all subjects is the possibility of transforming
all data into a common space for group analysis with tract-based morphometry.3
DISCUSSION / CONCLUSION
A DTI model is insufficient to track CTCs when
the seed region or tract itself is damaged by surgery. By applying a template,
the loss of diffusion information along the tract in a post-surgical patient
subject can be overcome. This study showed that the proposed method was
feasible and the template could be successfully transformed into the native
spaces of 21 subjects. Acknowledgements
No acknowledgement found.References
1. Ji Q., et al, “Measurement of projections
between dentate nucleus and contralateral frontal cortex in human brain via
diffusion tensor tractography“ Cerebellum. 2019,
18(4):761-769.
2. Garyfallidis E., et al “Robust and Efficient linear
registration of white-matter fascicles in the space of streamlines” NeuroImage,
2015, 117:124-140
3. Lauren J. et al “Tract-based morphometry for white matter
Group analysis”. NeuroImage, 2009, 45:124-140