Sen Jia1,2, Zhilang Qiu1,2, Lei Zhang2, Xin Liu2, Hairong Zheng2, and Dong Liang2
1University of Chinese Academy of Sciences, Shenzhen, China, 2Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
Synopsis
Joint intracranial and carotid 3D vessel wall
imaging (VWI) with an isotropic spatial resolution between 0.5-0.6 mm is promising
in diagnosing arterial wall diseases but leads to clinically impractical scan
time. CAIPIRINHA 3x3 undersampling with elliptical scanning is used to expedite
the VWI by 11-fold without less sampling the high-frequency region of k-space.
Iterative L1-ESPIRiT algorithm is employed for reconstruction with GRAPPA result
as the initialization. The scheme of Iterative Feature Refinement is embedded into L1-ESPIRiT
iteration to avoid potential over-smoothing issue. Finally, the 3D 11x VWI scan at an isotropic
resolution of 0.6 mm takes only 3.5 minutes.
Introduction
High-resolution MR vessel wall imaging (VWI) is
promising in detecting and characterizing wall diseases such as atherosclerosis
plaque, which frequently occur in the intracranial and/or carotid vascular territories 1. Jointly performing intracranial and carotid VWI facilitates
comprehensive and efficient examination of wall lesions in a single 3D scan 2.
However, achieving high spatial resolution and whole brain and
neck coverage simultaneously will lead to clinically impractical scan time. Long acquisition
time would deteriorate the motion robustness of VWI on patients and induce intensive
tradeoff between achievable imaging resolution and scan time.Methods
Combined Compressed Sensing and Parallel
Imaging was utilized to highly expedite the 3D VWI scan. Instead of using the usual
variable density Poisson-disc sampling (vdPDS), CAIPIRINHA 3 3x3 undersampling
with elliptical scanning was utilized in this work. The equidistant sampling scheme avoids the less sampling of high-frequency region of k-space in vdPDS which is crucial to the
image sharpness. Iterative L1-ESPIRiT algorithm 4 was used for reconstruction
with a GRAPPA result as the initialization. GRAPPA initialization would benefit
the suppression of aliasing artifacts and reduce the required iteration number to
reach convergence. The Iterative Feature Refinement 5 (IFR) scheme was integrated
into the iteration process of L1-ESPIRiT seamlessly to avoid the potential over-smoothing
problem due to nonlinear filtering.
In-vivo experiments were IRB approved with written informed consents
obtained from all subjects. All VWI scans were performed on a 3T scanner
(Siemens Tim Trio, Germany) with a 32-channel head and neck coil. Imaging
parameters were: T1 weighted SPACE sequence with non-selective excitation and sagittal
imaging orientation, FOV = 230-240 (RO, head-foot) x 210 (PE, anterior-posterior) x 192 (PAR, left-right) to achieve whole brain and neck coverage, encoding
matrix size = 384-400 x 352 x 320, imaging resolution = 0.6 mm with 2x interpolated reconstruction, TE/TR = 10/1000 ms, echo
train length (ETL) = 48. The scan time of 3D VWI of isotropic 0.6 mm resolution was
3.5 minutes. The CAIPIRINHA accelerated datasets were reconstructed online by
GRAPPA and IFR-L1ESPIRiT algorithms respectively. Both were implemented in the
open-sourced Gadgetron software 6. The GRAPPA reconstruction and the ESPIRiT
calibration step of IFR-L1ESPIRiT run on two 40-cores CPUs with 256GB memory, while the
iteration step run on three Nvidia Geforce 980Ti GPUs with 18GB memory. The computational
time for IFR-L1ESPIRiT with 20 iterations was approximate 3 minutes.Results
Figure 1 illustrates the VWI images
obtained by the proposed 11-fold acceleration scheme on a 62-years old healthy
male volunteer. Intracranial and carotid arterial walls are clearly depicted
on the curved multiplanar reconstruction (CMPR) of the resulted 3D image. Blood is nulled by the inherent dark-blood capability of SPACE sequence. In Figure
2, the 11-fold CAIPIRINHA accelerated VWI is compared with 11x vdPDS
accelerated VWI on a 60-years old healthy female volunteer. With the same
reconstruction algorithm, the vertebral arterial walls are more clearly imaged on the CAIPIRINHA
VWI image. The CAIPIRINHA accelerated dataset obtained from a 28-years old
healthy male volunteer are reconstructed online by IFR-L1ESPIRiT and GRAPPA
algorithms respectively. The results are compared in Figure 3. Both are free
of aliasing artifacts, while the basilar vessel walls on the GRAPPA reconstruction are deteriorated by heavy noise amplification. The proposed fast VWI scheme alleviates the intense tradeoff between the imaging resolution and scan time. Figure 4 demonstrates the VWI results at isotropic 0.6-, 0.55- and 0.5-mm resolutions on a 27-years
old healthy female volunteer. The three VWI scans are completed in 3.5, 4.2
and 5 minutes respectively. Improved isotropic resolution benefits the wall
depiction but at a cost of visibly degraded signal-to-noise ratio due to the reduced voxel size.Discussion
Joint intracranial and carotid VWI acquired at an isotropic resolution
of 0.6 mm was expedited into 3.5 minutes using 11-fold acceleration. CAIPIRINHA sampling and iterative feature refinement scheme were utilized
together to improve the wall imaging quality. The proposed fast VWI could alleviate the intensive tradeoff between VWI imaging resolution and scan time.
One limitation of proposed fast VWI method was the dramatically
increased computational burden and reconstruction time due to the tremendous encoding matrix size. Further work will focus
on boosting the reconstruction speed and improving the clinical robustness of
proposed VWI technique.Acknowledgements
This work is supported by the State Key
Program of National Natural Science Foundation of China (Grant No. 81830056)
and the National Natural Science Foundation of China (Grant No. 81801691).
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