Fred Tam1, Benson Yang1, and Simon J Graham1,2
1Physical Sciences, Sunnybrook Research Institute, Toronto, ON, Canada, 2Department of Medical Biophysics, University of Toronto, Toronto, ON, Canada
Synopsis
Building a flexible setup for parallel
transmission (PTx) MRI research is still challenging. A commercial
software defined radio device was tested for suitability in a revised
setup. Software was developed to make the device generate
radiofrequency (RF) bursts in response to triggers. Preliminary bench
tests showed quick and reliable triggering, consistent amplitude and
phase across channels, and successful runtime adjustment. An initial
PTx MRI demonstration showed capability for RF shimming in echo
planar imaging of a phantom. Further troubleshooting is planned to
reduce observed phase jitter, but the setup is already capable of a
range of PTx research applications.
Introduction
Parallel transmission (PTx) applies radiofrequency
(RF) power via multiple independent transmission channels. PTx is
becoming increasingly important for MRI,1 and optimization
of PTx is the subject of much research. Software-defined
radio (SDR), which substitutes a host computer system for dedicated
RF electronics, has been explored as a flexible, lower-cost
alternative for research into MRI2 and PTx.3
In the present work, an off-the-shelf SDR device
was integrated into an existing PTx research setup that substitutes
for an MRI system’s transmission chain in a modular manner,4
leveraging the original receiver chain, pulse sequences, etc. While a
previous iteration had latency and potential noise amplification from
processing the MRI system’s transmissions,3 the new
setup should avoid those issues and provide greater flexibility by
using newly generated RF transmissions. The SDR system was
characterized on the bench and then connected to a commercial 3‑T
MRI system for an initial demonstration of PTx RF shimming
capability.Methods
For a 4-channel prototype, one 4-channel Tx/Rx SDR
unit (Crimson TNG, Per Vices Corp.) was controlled by a desktop
computer (4-core Intel i5-2500, Ubuntu Linux 16.04). Based on
open-source sample code, a C++ program configured the SDR unit to
respond to triggers by transmitting RF bursts. Unlike the previous
iteration of this setup which streamed data continuously between the
SDR unit and host computer, triggers were handled internally by the
SDR unit, ensuring minimal latency and phase coherence between
channels. The software on the desktop computer continuously
maintained a queue of RF samples to be transmitted with each trigger.
Four independent sets of amplitude and phase data describing RF
pulses were initially read from a text file (Fig.1). Further runtime
amplitude and phase adjustments were applied separately to each
channel, then the samples were formatted and sent over 10-Gb network
links. For preliminary bench testing, an arbitrary function generator
(AFG3102, Tektronix) supplied triggers, and SDR outputs were recorded
using an oscilloscope (DSO-X 3034A, Agilent Technologies).
The SDR system was then connected to a 3‑T
MRI system (Prisma, Siemens Healthineers) via a custom coil plug.4
The MRI system’s RF transmissions were discarded in a load, and SDR
was used instead to generate new transmissions for PTx.
Synchronization was achieved by connecting to the MRI
system’s 10-MHz clock, and the RF unblank signal was used to
trigger the SDR unit via a custom optical-to-electrical convertor. As
an initial demonstration, a sphere phantom was imaged in a custom
Tx/Rx coil array, with the SDR unit generating a sinc pulse to
simulate the unmodified MRI system’s RF transmission during echo
planar imaging (EPI).Results
During bench testing, the overall pulse envelope
was consistent across channels (Fig.2a), with a 66-μs sampling
rate-dependent trigger delay at 200 kS/s. Triggering occurred
reliably during stress testing with a trigger interval of 621 μs,
using a short (625μs) sinc pulse similar to one used during prescan
frequency adjustment on the MRI system (Fig.2a). Just 47 % of one
host CPU and 3.8 MB/s network bandwidth were occupied during the
stress test. Phase and amplitude were coherent across channels and
successfully manipulated (Fig.2b-c), but some phase jitter with a
range of ±0.24 ns was visible from burst to burst, associated with
the alignment of the system clocks and the triggers from the function
generator. During 4-channel PTx MRI, the SDR output closely matched
the MRI system’s own RF transmissions (Fig.3a). The resulting image
without phase shifts across PTx channels (Fig.3c) was nearly
identical to using the MRI system’s transmissions (Fig.3b), and
simply applying quadrature phase shifts with the SDR setup improved
image uniformity dramatically (Fig.3d): A variation metric (SD/Mean)
dropped from 0.55 to 0.13 across the large region of interest
(Fig.3b).Discussion
Bench testing showed good performance, with
consistent amplitude and phase coherence across channels, as required
for PTx MRI. The trigger delay was short enough to fit in the
settling time between the RF unblank onset and the RF pulse, and a
trigger interval as short as the RF pulse itself could be sustained.
Thus, even for a fast EPI sequence, this setup should permit direct
substitution in the unmodified sequence if the new pulse is similar
in length to the original, as in RF shimming. Troubleshooting is
underway to ensure clock and trigger alignment for less phase jitter,
but the imaging results show that the system is already acceptable
for initial research applications. For example, although the current
software interface only supports static RF shim settings, amplitude
and phase adjustments were applied during runtime, making it possible
to study dynamic RF shimming. The software also supports independent
specification of pulses in each channel, required for methods like
Transmit SENSE.5 Finally, the initial software uses little
CPU and network resources in this triggered burst mode, leaving ample
resources for expansion to higher PTx channel counts and possibly
realtime feedback via SDR receiver channels also available on this
SDR device.Conclusion
An off-the-shelf SDR system operating in triggered
burst mode was tested in a setup for PTx MRI research. Initial bench
testing and MRI demonstrated good performance. Additional development
is required to improve remaining timing limitations, but the system
already seems capable of investigating a range of PTx applications.Acknowledgements
Thanks to the Canada Foundation for Innovation for funding, and to Pei-Shan Wei for the lovely sinc pulse and helpful talk.References
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