Mario Bacher1,2, Lorenzo Di Sopra1, Peter Speier2, Davide Piccini3, Anna-Giulia Pavon1, Christopher Roy1, Juerg Schwitter1, Jérôme Yerly1, and Matthias Stuber1
1Department of Radiology, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland, 2Siemens Healthineers, Erlangen, Germany, 3Siemens Healthineers, Lausanne, Switzerland
Synopsis
The Pilot Tone is a novel motion
sensing method capable of simultaneous, sequence independent measurement of
respiratory and cardiac motion. Here, we show that Pilot Tone motion data can
be used as an alternative to self-gating in a free-breathing, cardiac- and
respiration resolved CMRI sequence. We demonstrate in a patient cohort that
Pilot Tone motion information correlates well with ECG ground-truth and
self-gating respiratory signals.
Introduction
The Pilot
Tone navigator1 is a novel motion sensing method capable of measuring physiological
motion. A weak high-frequency magnetic field $$$\mathbf{B}_{PT}$$$ is generated within the bore,
which is then modulated by the changing electromagnetic environment due to changes
in tissue distribution from respiration and cardiac activity. The frequency $$$\omega_{PT}$$$ is chosen outside the imaging bandwidth yet within the operating
bandwidth of the MR receiver. Thus, the modulated field $$$\mathbf{B}_{PT}$$$ can be measured in
each channel using the existing receiver hardware to obtain the multidimensional Pilot Tone
signal $$$\mathbf{S}_{PT}(t)$$$. We have previously demonstrated that individual channels
can be linearly combined in such a way as to separate cardiac and respiratory
motion2. We now show that this motion information can be used instead of
self-gating in a free-breathing, cardiac- and respiration resolved 5D MRI reconstruction.Methods
Eight patients
were scanned at 1.5T in an MRI scanner with integrated PT generator (MAGNETOM
Sola with Biomatrix Body12 coil, Siemens Healthcare, Erlangen, Germany)
using a prototype free-running sequence3 based on a 3D radial acquisition4 (TE: $$$1.56\,ms$$$, TR: $$$72.43\,ms$$$, FoV: $$$220\,mm$$$, $$$2\,mm^3$$$ resolution, scan-time: $$$2.4\,min$$$).
The cardiac-
and respiratory motion signals $$$s_{card,PT}(t)$$$ and $$$s_{resp,PT}(t)$$$ were extracted from
$$$\mathbf{S}_{PT}(t)$$$ blindly, i.e. without any additional information using Independent
Component Analysis (FastICA5) and Principal Component Analysis (PCA)
respectively.
To
eliminate any residual respiratory motion component in $$$s_{card,PT}(t)$$$ and for
de-noising, an IIR forward/backward bandpass-filter ($$$f_{c,lo}=0.7\,Hz$$$, $$$f_{c,hi}=6\,Hz$$$) was applied to $$$s_{card,PT}(t)$$$. Trigger timepoints were then found
using Matlab’s findpeaks function as local maxima of $$$s_{card,PT,filt}(t)$$$ (see
Fig. 1). The extraction and processing of the SG signal is detailed as part of
the fully self-gated (SG) free-running framework in Di Sopra et al6. Note
that the triggering-algorithm in [6] uses zero-crossings of the SG cardiac
signal instead of local maxima.
Triggers from PT and SG were compared to ECG ground-truth in terms of
trigger-delay (temporal distance from ECG triggers), trigger-jitter (one standard-deviation of trigger-delay) and R-R interval (see Fig.
2). To facilitate comparability between patients, all time-measurements are
given as normalized values in percent of the patients mean R-R interval from
ECG.
Correlation between PT respiratory signals obtained from PCA (blind) and SG
respiratory signals $$$s_{resp,SG}(t)$$$ (Fig. 3b) are reported in Tab. 1. Additionally, we attempted
to find for PT data the linear combination that best matches $$$s_{resp,SG}(t)$$$, i.e.
the superior-inferior (SI) component of respiration, by solving for
$$\min_x \left| \mathbf{x} \mathbf{S}_{PT}-s_{resp,SG} \right|$$ (see Fig. 3a)
To
demonstrate equivalency between cardiac and respiratory binning information
from PT and SG, two datasets were reconstructed using a prototype
reconstruction algorithm6 from PT and SG motion information respectively
(Fig. 4).Results
From 8
scanned patients, two had to be excluded from analysis as ECG recording failed (see Tab. 1). On average, trigger
points from local maxima of $$$s_{card,PT}$$$ correspond very well to ECG R-peak
(mean absolute delay with respect to R-peak: PT:$$$\,4.73\,\%RR$$$, SG:$$$\,17.47\,\%RR$$$) and
show slightly less jitter than SG derived triggers (PT:$$$\,4.89\,\%RR$$$, SG:$$$\,6.12\,\%RR$$$).
Mean R-R intervals from both PT and SG correspond very well to ECG ground-truth
(PT:$$$\,100.12\,\%RR$$$, SG:$$$\,100.25\,\%RR$$$).
PT respiratory
signals found by PCA correlated well to those from SG (mean absolute
correlation:$$$\,0.91$$$) and PT data were found to contain the specific SG
respiratory signal almost exactly (mean correlation:$$$\,0.98$$$).
Images
reconstructed from $$$\mathbf{S}_{PT}$$$ (cardiac and respiration from blind
separation) appear visually similar and comparable in sharpness to those
reconstructed from SG data (see Fig. 4).Discussion
We
demonstrated that motion information obtained from PT correlates well to that from self-gating both for cardiac and respiratory motion and can be used to
retrospectively bin and reconstruct 5D motion-resolved free-running acquisitions while offering the advantage of sequence independent high sampling
rate, avoiding the need for navigator readouts or periodic SI-projections. This
potentially offers enhanced flexibility in the design of k-space trajectories.
We
hypothesize that the PT signal is linked to cardiac volume, prompting the use
of local maxima as trigger points which, under this assumption, should mark the
onset of mechanical contraction. Results seem to confirm this hypothesis, with
local maxima appearing close to ECG R-peak and, on average,
reduced trigger-jitter compared to SG.
$$$\mathbf{S}_{PT}$$$ was previously found to contain multi-dimensional respiratory motion
information: By calibrating to some seconds of S-I and A-P image navigators,
motion curves corresponding to movement of both chest wall and liver dome can
be extracted from $$$\mathbf{S}_{PT}$$$7. In our cohort, the strongest
principal component of $$$\mathbf{S}_{PT}$$$ yields strong correlation to the
respiratory signal from SG, but does not perfectly match it. However, the
information of $$$s_{resp,SG}(t)$$$ can be almost perfectly reconstructed from $$$\mathbf{S}_{PT}$$$ showing that the information is, in principle, contained in $$$\mathbf{S}_{PT}$$$.
This multidimensional information could be utilized in the future by e.g.
obtaining the S-I and A-P respiratory signals in a short calibration scan that
precedes the image acquisition.Conclusion
The Pilot tone navigator is a very attractive alternative
to SG for fully self-gated free-running MRI as it allows for accurate
respiratory and cardiac binning prior to compressed sensing reconstruction.
This concept further removes the need for ECG lead placement and R-wave
triggering, and it can be used completely independent of sequence parameters
and acquisition schemes, allowing for more flexibility in the
design of sampling patterns. References
[1] P. Speier et al. PT-Nav: A Novel Respiratory Navigation Method for Continuous Acquisition Based on Modulation of a Pilot Tone in the MR-Receiver, Proc. ESMRMB 129:97-98, 2015.
[2] M. Bacher et al. Retrospective Evaluation of Pilot Tone Based Cardiac Trigger Quality In A Volunteer Cohort, Book of Abstracts ESMRMB 2017 30:360- 361.
[3] S. Coppo et al., Free‐running 4D whole‐heart self‐navigated golden angle MRI: Initial results, Magn. Reson. Med., 74: 1306-1316. doi:10.1002/mrm.25523
[4] D. Piccini et al. Spiral Phyllotaxis: The Natural Way to Construct a 3D Radial Trajectory in MRI. Magnetic Resonance in Medicine 2011, 66, 1049–1056.
[5] A. Hyvärinen et al.: A Fast Fixed-Point Algorithm for Independent Component Analysis. Neural Computation, 9(7):1483-1492, 1997
[6] L. Di Sopra et al., An Automated Approach to Fully Self-Gated Free-Running Cardiac and Respiratory Motion-Resolved 5D Whole-Heart MR Imaging. Magn Reson Med 2019, In Press
[7] L. Schröder et al. “Two-Dimensional Respiratory-Motion
Characterization for Continuous MR
Measurements Using Pilot Tone Navigation”, Proceedings of the
24th Annual Meeting of the ISMRM ﴾ISMRM 2016﴿, #1876