Mihika Gangolli1, Elizabeth Hutchinson2, Ann McKee3, Joong Hee Kim1, Sinisa Pajevic1, and Peter Basser1
1National Institutes of Health, Bethesda, MD, United States, 2BME, University of Arizona, Tucson, AZ, United States, 3Boston University, Boston, MA, United States
Synopsis
Diffusion tensor and propagator metrics are compared directly in post-mortem cortex specimens from humans with chronic traumatic encephalopathy. Significant correlation was found between fractional anisotropy and non-Gaussianity with pTau staining in the sulcal depths. Additionally, GFAP staining of astrocytosis in the white matter was significantly correlated with Trace, FA, return-to-origin probability and propagator anisotropy. Cluster-based methods were also applied to explore the multivariate diffusion signature associated with CTE pathology. These findings suggest that diffusion metrics may be sensitive to CTE-related pathology.
Introduction
A main advantage of diffusion MRI (dMRI)
is the ability to reveal microscale tissue abnormalities that are invisible to
other MRI modalities, sensitively detecting differences in net water
displacements across tissue environments with different cellular features. This
approach could be especially promising for identifying markers of pathology in
mild and severe TBI1 for which conventional MRI markers are
absent, but striking alterations at the cell and protein levels are observed in
autopsy. One such
application would be in the diagnosis of chronic traumatic encephalopathy
(CTE), a neurodegenerative disease associated with one or more head injuries2. Currently, a
confirmed diagnosis of CTE is made post-mortem using immunohistochemistry to
identify neuronal and astroglial phosphorylated tau (pTau) preferentially
distributed in depths of cortical sulci2,3. Diffusion tensor
imaging (DTI) fractional anisotropy (FA) has been previously explored for
correspondence with this histopathology, showing a modest correlation with
axonal disorganization in white matter adjacent to pTau laden sulci in CTE
tissues, but no direct relationship between existing DTI metrics and pTau4. The objective of
the current study is to extend this analysis to include metrics from the mean
apparent propagator (MAP) framework and sulcal pTau and concomitant pathology
(e.g., white matter gliosis). In
addition, we apply two statistical approaches to improve the identification of
radiologic-pathologic correspondence in this challenging tissue environment and
experimental paradigm: mixed effects analysis to accommodate cross sample
variability and unsupervised segmentation of unique tissue regions using a k-means
based clustering algorithm.Methods
Ten formalin fixed cortical tissue samples from
the superior frontal cortex (Brodmann Area 8/9) with a confirmed diagnosis of
Stage III/IV CTE were obtained from the Boston University CTE Center brain
bank. Diffusion data with spatial resolution of 250x250x500 µm were acquired on
an 11.7T MRI scanner (Agilent, Palo Alto, CA) using a standard 2D spin echo sequence
as previously described4,5. High angular
resolution diffusion data (TR/TE = 1400/30 ms) were collected across 202
noncollinear diffusion sensitized directions with a maximum b-value of 8,000
s/mm2 along with ten non-diffusion weighted (b = 0 s/mm2)
volumes.
DTI and MAP-MRI image processing and model fitting was
performed using TORTOISE software and scalar metric maps for the Trace (TR),
FA, non-Gaussianity (NG), return to the origin probability (RTOP) and
propagator anisotropy (PA) were analyzed using ROIs placed manually using
ITKsnap by an investigator blinded to tissue histopathology.
Following acquisition of dMRI data, tissue specimen were
sectioned serially into 50 µm thick sections. Sections were stained with AT8
for pTau immunoreactivity or GFAP for astrogliosis, followed by counterstaining
with hematoxylin. High resolution images of stained tissue sections were
acquired on an Axio Scan Z1 digital slide scanner (Zeiss, Thornwood, NY) and
downsampled to 10x magnification for semi-automated quantitative histology.
Regions of interest were identified in sulcal depths of gray matter and
cortical white matter for quantification of pTau and GFAP staining respectively
by an investigator blinded to diffusion metrics. Percent area of thresholded
AT8 and GFAP staining in each ROI were used to quantify abundance of pTau and
astrocytes (Figure 1).
Statistical relationships between dMRI and quantitative
histology ROI values were evaluated using linear mixed effects modeling in the R statistical software package
with cortex and white matter analyzed separately and specimen number used as a random variable. Inference tests
were made using analysis of variance.
In order to examine imaging abnormalities defined by the
combined behavior of multiple metrics, we used a k-means based clustering
algorithm which groups voxels based on their metric similarity (FA, NG, PA,
RTOP and TR) and spatial proximity of the voxels. When
appropriate, we enforce spatial contiguity by
iteratively re-assigning smaller disconnected regions until contiguity is
satisfied.Results
The results of LME analysis of quantitative
histology and diffusion MRI values are shown in Figure 2 and indicate significant relationships for
both sulcal regions and white matter, but with stronger significance for the
white matter. In the sulci, there were
no significant findings for Iba-1, but for pTau, both FA and NG demonstrated
significant correlation. In the white
matter, there were no significant findings for Iba-1, but for GFAP staining four
of five metrics demonstrated significance.
The relationships between histology and diffusion metrics
were further evaluated by plotting value pairs according to sample in the sulci
(Figure 3) where lower FA and higher NG corresponded to high pTau staining and
in the white matter (Figure 4) where there was a negative correlation for both
FA and PA although the visual pattern for these metrics was quite distinct with
prominent decreases in FA and only modest decreases in PA despite higher
significance for this metric. K-means clustering using DTI and MAP MRI metrics was able to identify ROIs in both gray and
white matter (Figure 5), providing an automated method to select MR based ROIs
to compare with quantitative histology maps. Discussion
The main findings of our analyses were significantly reduced
FA and increased NG in regions of pTau staining and reduced FA and PA in
regions of white matter astrogliosis although it is clear that single marker
relationships are limited and the combination of different metric behaviors (e.g.
using cluster-based segmentation) may be better able to discern pathology in a
meaningful way.Acknowledgements
We are grateful to the donors and their families who were
able to make this study possible. We would also like to thank the Boston
University CTE Center in particular Thor Stein and Victor Alvarez
for sample procurement and for providing diagnosis information regarding tissue
specimen. Specimen imaging was performed at the Small-Animal
Imaging Facility of the Mallinckrodt Institute of Radiology and the Center for
Cellular Imaging at Washington University School of Medicine. Support for the
data collection portion of this study was provided by NIH UO1 NS086659-02
(Overall P.I: A. McKee, Subproject 3 P.I: Brody).References
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