Jochen Keupp1, Doneva Mariya1, Jakob Meineke1, and Peter Forthmann1
1Philips Research, Hamburg, Germany
Synopsis
T2w-MRI
plays an important role in prostate cancer providing information on the
location/grade in diagnosis or surveillance. T2-mapping may provide objective characterization
but is hampered by long acquisition time, which has been addressed by dedicated
acceleration techniques (e.g. kt-T2 mapping). We investigate further
acceleration of T2-mapping by prospective variable sub-sampling in the echo
time domain, comparing regular or irregular patterns in combination with
compressed sensing using low rank and sparsity constraints, towards a routine
clinical T2 mapping protocol with increased volume coverage. Prostate and
phantom T2-maps with 24 slices (1×1×3mm3 voxel) were acquired in 5½
minutes with promising map quality.
Introduction
T2w MRI plays an important role in
prostate cancer (PCa) providing information on the location, volume and grade
in diagnosis or active surveillance. However, the T2w hypointensity scored by
the radiologist is hampered by low reproducibility of the acquisition. To
address this, T2 mapping is explored for objective PCa characterization1.
Multi-echo spin-echo based T2 mapping with sufficient organ coverage and
spatial resolution (≤1mm in plane) is inherently slow.
Previously, kt-T2 was proposed as a fast T2 mapping approach2,
achieving a scan time of 5 minutes for 14 slices (40 mm FH coverage, 32 echoes)
and was successfully applied in patient and reproducibility studies3.
Based on regular k-space sub-sampling, shifted for each echo time, the dedicated
kt-T2 reconstruction estimates missing data from adjacent echoes using a
trained kernel.
Here, we hypothesize that compressed
sensing (CS) with low rank and sparsity constraints can provide higher acceleration
in order to allow better coverage while maintaining map quality and acquisition
time (5 min). Two approaches were investigated in phantom and prostate
volunteer examinations: (1) Use a CS reconstruction on regularly sub-sampled
data as in kt-T2; (2) Apply an irregular Poisson disk sampling (ky-echo)
pattern to adapt the sub-sampling for CS reconstruction.Methods
Irregular (see Fig.1a) or regular sub-sampling patterns (Fig.1b) along the
echo time dimension were implemented by introducing ky blip
gradients during a fast multi-echo spin echo readout. The regular pattern was
similar as in kT-T2 mapping2, and the irregular pattern used Poisson
disk sampling in the ky-TE plane. 3 lines were fully sampled.
Reconstruction used a fast low rank and
sparsity regularization algorithm4, implemented in the MRI system SW,
solving the following minimization problem for N echoes:
$$\underset{M}{\operatorname{argmin}} \left( \frac{1}{2} \| EM-P \|^2_2 + \lambda_1 \| W(M) \|_1 + \lambda_2 \| M \|_{*} \right)$$
Here, M is a matrix with N columns
of vectorized echo images,
P a matrix of N measured k-spaces, E the
encoding matrix,
including sub-sampling and coil sensitivity maps, $$$\lambda_1$$$ and $$$\lambda_2$$$ are regularization parameters (values chosen
here 0.025 and 0.0015), W is the wavelet transform, $$$\| M \|_{*}$$$ is the nuclear norm of
matrix M. T2 maps were computed from the multi-echo series using the standard
MR system reconstruction (maximum likelihood estimation).
Experiments were performed on a 3T MRI system (Ingenia, Philips, NL)
using a reference phantom (Eurospin-TO5, Diagnostic Sonar, GB, 12 samples T2=50…370ms,
T1=220…1620ms, see Fig2.a) and volunteer examinations (n=3), with informed
consent obtained. The following imaging parameters were used: FOV 160×160×72 mm3,
voxel 1.0×1.0×3.0 mm3, reconstruction 0.7mm, 24 slices; acceleration
R=11, TR = 4800ms, TEn = (24 + n*12) ms, α=90°, refocusing control αrefo,n={172°,132°,120°,120°,120°…}, B1max=8μT, whole body SAR < 1.7W/kg, scan
duration 5½min. A reference T2 map was acquired for the phantom using identical
parameters except for 2D single slice, SENSE R=2.4 (no CS) and a scan duration
of 25min, as well as a T2w fast spin echo scan (voxel size 0.4×0.6×3.0 mm3,
TR/TE=2780/110ms, CS-SENSE R=2, 2min46s).Results
Figure 2 shows exemplary results from fast T2-mapping
phantom tests. The reference Fig.2b is compared to the multi-slice fast acquisition
with Poisson disk sampling Fig.2c and regular sampling pattern Fig.2d. Selected
echo images are shown in Figure 3, (Fig.3a irregular, Fig.3b regular sampling).
The irregular sampling shows consistent image quality (T2-maps and echo images)
while the regular sampling pattern reveals residual foldover artifacts. Fitting
the T2 values between reference and CS acquisition shows consistent linearity
but some bias. For the irregular case: T2[c] = 0.965×T2[b] + 20.2ms (R = 0.9995).
Regular sampling results are less consistent in terms of quantitative values
and show a larger bias: T2[d] = 0.884×T2[b] + 46.2ms (R=0.9979).
Figure 4 shows 6 selected adjacent slices from
a prostate volunteer exam. T2-maps based on prospective irregular and regular sub-sampling
are shown in Fig.4a and Fig.4b, respectively, using greyscale with T2=0…250ms.
Fig.4c shows the same slices from a T2w reference scan. While the prostate is
sharply depicted in the T2 maps for all slices in the irregular case, some
foldover and slight blurring of the maps is apparent for the regular sampling
case.Discussion
Quantitative T2 maps at the chosen high
acceleration could be obtained in phantom and volunteer experiments with a
promising quality and within a clinically relevant acquisition time by applying
variable sub-sampling across echoes and CS reconstruction. The CS acceleration enables
acquiring T2 maps with the same FH coverage (e.g. 24 slices, 72mm) as
conventional T2w-MRI, avoiding the precise planning required in previous works to
fit the prostate into the imaging volume. Regarding the consistency of
quantitative values and the map quality (foldover artifacts), the irregular pattern
was found superior to the regular sampling, given the same acquisition time and
reconstruction parameters. With the chosen reconstruction parameters, the
quantitative values show a bias of 20ms (irregular sampling), which is relevant
for the short T2 times in prostate cancer (about 100ms). Further investigation is
underway to reduce this bias. Using a larger number of echoes with shorter echo
time (e.g. 40 echoes with ΔTE=9ms)
further improvement of the T2 reconstruction stability can be expected.Acknowledgements
No acknowledgement found.References
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