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A Metabolite Specific 3D Stack-of-Spiral bSSFP Sequence for Improved Lactate Imaging in Hyperpolarized [1-13C]Pyruvate Studies on a 3T Scanner
Shuyu Tang1, Robert Bok1, Hecong Qin1, Galen Reed2, Mark VanCriekinge1, Romelyn Delos Santos1, William Overall2, Juan Santos2, Jeremy Gordon1, Zhen J. Wang1, Daniel Vigneron1, and Peder E.Z. Larson1
1University of California, San Francisco, San Francisco, CA, United States, 2HeartVista, Los Altos, CA, United States

Synopsis

This work describes a novel 3D bSSFP sequence that integrates a lactate specific excitation pulse and stack-of-spiral readouts for improved lactate dynamic imaging in hyperpolarized [1-13C]pyruvate studies on a clinical 3T scanner. Compared with metabolite specific GRE sequences, the MS-3DSSFP sequence showed an overall 2.5X SNR improvement for lactate imaging in rat kidneys, tumors of TRAMP mice and human kidneys.

Introduction

Magnetic resonance imaging with hyperpolarized 13C-labeled compounds via dynamic nuclear polarization (DNP) has been used to non-invasively study metabolic processes in vivo.1,2 The MR signals of the hyperpolarized [1-13C]pyruvate and its downstream metabolites are typically acquired using gradient echo ("GRE") sequences (CSI, 2,3 multi-echo IDEAL,4,5 metabolite specific EPI6,7 or spiral8 acquisition). Compared to GRE acquisitions, the balanced steady state free precession ("bSSFP")9–15 sequence can acquire the nonrenewable hyperpolarized magnetization more efficiently by repetitively refocusing transverse spins. This article presents a novel metabolite specific 3D bSSFP sequence ("MS-3DSSFP") with stack-of-spiral readouts for improved dynamic lactate imaging in hyperpolarized [1-13C]pyruvate studies on a clinical 3T scanner.

Methods

The proposed MS-3DSSFP sequence (Figure 1) consists of a multiband RF pulse and a center-out 3D uniform-density stack-of-spiral readout. The RF pulse was designed using a prior approach16 to minimize the pulse duration. This pulse had a duration of 9ms, a maximum B1 of 0.2195G, a 40Hz passband on lactate (0Hz), a 40Hz stopband with 5% ripples on pyruvate hydrate (-128Hz) and 40Hz stopbands with 0.5% ripples on bicarbonate (-717Hz), pyruvate (-395Hz) and alanine (-210Hz). The 3D stack-of-spiral trajectory consists of 16 stacks and each stack consists of four 3.8ms interleaves. All gradients have zero net area over the course of one repetition. The MS-3DSSFP sequence was implemented on a GE Signa MR 3T scanner (GE Healthcare, Waukesha, WI) using a commercial software (RTHawk, HeartVista, Los Altos, CA).
The excitation profiles of the RF pulse and its averaged transverse magnetization over all echoes of bSSFP acquisitions were simulated. Simulation parameters are: number of RF pulses = 50, TR = 15.3ms, T1 = 30s, T2 = 1s, 6 non-linear ramp preparation pulses, flip angle = 60o. To test our MS-3DSSFP sequence in vivo, hyperpolarized [1-13C]pyruvate experiments were performed on three healthy Sprague-Dawley rats, three transgenic adenocarcinoma of mouse prostate (TRAMP) mice and two patients with renal tumors that required surgical removal. 13C sequence parameters of all experiments are presented in Figure 2. Each subject received two identical injections of hyperpolarized [1-13C]pyruvate (SpinLab, GE healthcare) to compare the MS-3DSSFP with metabolite-specific gradient echo sequences “MS-GRE”. In animal studies, the MS-GRE sequence was a 3D sequence consisting of a single-band spectral-spatial excitation and stack-of-spiral readouts. In human studies, the MS-GRE sequence was a 2D multi-slice sequence with the same excitation pulse and the same single-shot spiral readout.

Results & Discussion

Simulated excitation profiles of the MS-3DSSFP sequence and its averaged transverse magnetization over all bSSFP echoes are shown in Figure 3. Frequency bands and stopband ripples of the excitation profiles were as desired. Most banding artifacts fell outside of the desired frequency bands except one banding artifact which was observed 18Hz upfield from the alanine frequency. Figure 4 shows representative dynamic lactate images in hyperpolarized [1-13C]pyruvate studies of TRAMP mice, healthy rats and a renal patient. Metabolites signal ratios between the two experiments are presented in Figure 5. Compared with MS-GRE sequences, the MS-3DSSFP sequence shows an overall approximately 2.5X SNR improvement and demonstrates higher SNR performance at every time point for lactate imaging in rat kidneys, tumors of TRAMP mice and human kidneys. Comparing AUC between the two experiments, there is almost no difference in pyruvate and a 5% to 20% difference in alanine AUC, which demonstrates the lactate spectral selectivity of the MS-3DSSFP sequence.

Conclusion

This work describes a novel 3D bSSFP sequence that integrates a lactate specific excitation pulse and stack-of-spiral readouts for improved lactate dynamic imaging in hyperpolarized [1-13C]pyruvate studies on a clinical 3T scanner. Compared with MS-GRE sequences, the MS-3DSSFP sequence showed an overall 2.5X SNR improvement for lactate imaging in rat kidneys, tumors of TRAMP mice and human kidneys. Future work will include extending the applications of the proposed sequence for imaging other regions with acceptable B0 homogeneity such as human brain, as well as imaging other metabolites (e.g. pyruvate, bicarbonate) in hyperpolarized [1-13C]pyruvate studies.

Acknowledgements

The authors thank Lucas Carvajal, Jennifer Chow, Hsin-yu Chen, Justin Delos Santos, James Slater, Namasvi Jariwala, Mary Mcpolin, Kimberly Okamoto for their help on the project. This work was supported by the National Institute of Biomedical Imaging and Bioengineering (P41EB013598, R01EB016741, U01EB026412), the American Cancer Society (RSG-18-005- 01-CCE), and a UCSF Research Evaluation and Allocation Committee Shared Instrument Award.

References

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Figures

Figure 1. Pulse sequence of the proposed MS-3DSSFP acquisition (a). It consists of a lactate specific excitation pulse and a 3D center-out stack of spiral readout (c). Each stack (b) consists of four interleaves. The details of the excitation pulse are described in Figure 2. Lighted shaded regions refer to the data acquisition window.

Figure 2. 13C sequence parameters used in rat, TRAMP and human studies with hyperpolarized [1-13C]pyruvate injection. For the same subject, two experiments (A and B) would be performed back-to-back for comparison. In experiment A, lactate signals were acquired with the metabolite specific 3D SSFP (MS-3DSSFP) sequence while pyruvate and alanine signals were acquired with the metabolite specific GRE (MS-GRE) sequences. In experiment B, all three metabolites were acquired with MS-GRE sequences.

Figure 3. Simulated excitation profiles of the excitation pulse alone (blue) and its averaged transverse magnetization over 64 pulses of a bSSFP acquisition (red). An overall view of the profile is shown in graph (a) and graph (b). Zoomed views (±40Hz) of excitation profiles around each metabolite are shown in graph (c) and graph (d). The excitation pulse has a 40Hz passband on lactate (0Hz), a 40Hz stopband of 5% maximum ripple on pyruvate hydrate (-128Hz) and 40Hz stopbands of 0.5% maximum ripples on bicarbonate (-717Hz), pyruvate (-395Hz) and alanine (-210Hz).

Figure 4. Representative dynamic images of TRAMP mouse tumors, rat kidneys and a human renal tumor of the experiments described in Fig. 3. Each image is displayed to its own maximum signal to visualize metabolites at all time points. The MS-3DSSFP sequence shows improved image quality compared to the MS-GRE sequence, which is evident by comparing images at later time points (e.g. 13th, 16th).

Figure 5. Metabolites AUC SNR ratios and lactate ratios of dynamic curves between experiment A (pyruvate and alanine: MS-GRE; lactate: MS-3DSSFP) and experiment B (pyruvate, lactate and alanine: MS-GRE) at each time point. Experiment parameters are described in Figure 3. Data of rat kidneys, TRAMP tumors and human kidneys were included in the summary with a criterion of SNR greater than 3. The averaged lactate ratios are shown by the solid lines and ±1 standard deviations are shown by the dashed lines.

Proc. Intl. Soc. Mag. Reson. Med. 28 (2020)
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