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High-resolution phosphocreatine mapping using artificial neural network-based CEST MRI at 3T: A validation study
Lin Chen1,2, Michael Schär1,3, Kannie W.Y. Chan1,2,4, Jianpan Huang4, Zhiliang Wei1,2, Hanzhang Lu1,2, Qin Qin1,2, Robert G. Weiss1,3, Peter C.M. van Zijl1,2, and Jiadi Xu1,2
1Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, MD, United States, 2F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Research Institute, Baltimore, MD, United States, 3Division of Cardiology Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, United States, 4Department of Biomedical Engineering, City University of Hong Kong, Hong Kong, China

Synopsis

Phosphocreatine (PCr) plays a vital role in neuron and myocyte energy homeostasis, and measurement of PCr provides a unique way to achieve insight into cellular energetics. Our previous study demonstrated that high-resolution PCr mapping of human skeletal muscle can be obtained on standard 3T clinical MRI scanner using artificial neural network-based chemical exchange saturation transfer (ANNCEST). Here, for further validation, we applied ANNCEST to measure PCr changes in exercised skeletal muscle and compared the measures with those from 31P magnetic resonance spectroscopy. The feasibility of estimating spatially resolved PCr recovery rate constants using ANNCEST was also demonstrated.

Introduction

Phosphocreatine (PCr) is a high-energy phosphate compound that is abundant in muscle and used by creatine kinase isoenzymes to generate adenosine triphosphate from adenosine diphosphate(1). To date, phosphorus-31 magnetic resonance spectroscopy (31P MRS) has been the established method for non-invasively detecting and quantifying PCr in vivo(2-4). However, the inherently low detection sensitivity and limited availability on the majority of clinical MRI scanners hinder the wide application of 31P MRS to detect PCr in clinical practice. Chemical exchange saturation transfer (CEST) is an MRI sensitivity-enhancing approach that has shown great potential in detecting several low-concentration metabolites in vivo(5-7). Our previous study demonstrated that high-resolution PCr mapping can be obtained on a standard 3T clinical MRI scanner using artificial neural network-based chemical exchange saturation transfer (ANNCEST)(8). In this study, we applied ANNCEST to detect and quantify PCr depletion and recovery in exercised human skeletal muscle, and validated these measures by comparing them with those from 31P MRS. We also demonstrate the feasibility of estimating an ANNCEST PCr recovery rate map which can be used to estimate maximal mitochondrial oxidative capacity(3).

Methods

The flowchart of ANNCEST is shown in Fig. 1. The CEST experiments and 31P 2D MRS on exercised human skeletal muscle were performed on a 3T Philips MRI system equipped with a 2-channel surface coil for 1H imaging and a 31P transmitting/receiving coil placed beneath the calf muscle of the lower extremity for 31P 2D MRS respectively. Four healthy subjects (age 27± 5 years) were recruited for in-magnet plantar flexion exercise (PFE). CEST images were acquired using a single-shot TSE sequence with TR = 3 s, TE = 9.3 ms, TSE factor = 37, a matrix size of 72 × 72, and a resolution of 2.2 × 2.2 × 20.0 mm3. The Z-spectra between 1.3 ppm and 3.5 ppm were sampled with saturation offset number of 30 and a total scan time of 1.5 min. The 31P 2D MRS was performed with TR = 1.5 s, TE = 1.44 ms and a total scan time of 1.5 min. The k-space data were then reconstructed on a 16 × 16 grid leading to a voxel size of 10 × 10 mm2. The slice thickness of 31P 2D MRS was determined by the excitation profile of the 31P coil, which is in the order of 80 mm. The exercise protocol involved PFE with repetitively lifting a 16 lb weight at a rate of 1 Hz for 80 s, and then holding the load for 90 s before stopping all exercise to allow subsequent measures of post-exercise PCr recovery.
Linear regression analysis was performed to compare PCr maps obtained by ANNCEST and 31P 2D MRS using linear model , where b refers to the linear regression coefficient. ANNCEST results were downsampled to match the matrix size of 31P 2D MRS. To remove the motions during ANNCEST experiments, image registration was applied to CEST images using Medical Imaging Registration Toolbox (9).
The PCr recovery time constant $$$\tau_{PCr} $$$ was fitted using the following equation(10):
$$PCr(t) = PCr_{0}+\triangle PCr\cdot(1-e^{-t/\tau_{PCr}})[1]$$
where PCr0 is the PCr concentration at the end of exercise, $$$\triangle$$$ PCr refers to the difference in PCr concentration between resting and end of exercise.

Results and Discussion

The PCr mapping using ANNCEST was validated by comparison with 31P 2D MRS measures obtained before and during in-magnet PFE. Subjects underwent the same exercise protocol, once with CEST acquisitions and once with 31P 2D MRS, in varied order. Shortly after the exercise, the PCr depletion in the gastrocnemius muscles recovered to basal values on the PCr maps obtained by both ANNCEST and 31P 2D MRS as shown by the representative results in Figs. 2b,c. The Z-spectra for a region of interest in the gastrocnemius muscles obtained at two-time points are also plotted and demonstrate the decrease of the PCr CEST peak after the exercise (Figs. 2d,e), namely from 30.4 mM to 15.4 mM. The PCr depletion observed in the muscle regions is in good agreement with those reported previously in healthy volunteers using 31P MRS, in which the gastrocnemius muscle showed significantly greater PCr depletion than other muscle groups during PFE(11-13). PCr concentrations obtained by ANNCEST during exercise agreed very well with those measured by 31P 2D MRS, as indicated by the linear regression coefficient (b = 0.923 with 95% confidence intervals from 0.886 to 0.960) and Bland-Altman analyses between two methods in Figs. 2f,g, respectively.
A preliminary result of estimating spatially resolved map of PCr recovery rate constant using ANNCEST is shown in Fig. 3 and a recovery time constant of 70.7±55.4 s was obtained, which is consistent with that reported in the previous study (63.1 ± 25.9 s)(14). However, the temporal resolution of PCr ANNCEST in the current study (i.e. 90 s) was too low to capture very detailed dynamic changes. Future possibilities for reducing the scan time of PCr ANNCEST are adopting fewer saturation offsets or utilizing fast CEST sequences(15-17), which needs further study.

Conclusion

Bland Altman analysis shows that the PCr ANNCEST MRI measures agree with those from 31P MRS, suggesting that ANNCEST has potential as a cost-effective and widely available method for measuring PCr and diagnosing related diseases.

Acknowledgements

This work was supported by the grants from NIH: R01EB015032, P41EB015909, R01 HL61912, R01HL63030, R03NS109664, 1S10OD021648, and DOD W81XWH-18-1-0797.

References

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Figures

Figure 1. Schematic flowchart of ANNCEST. The Z-spectra are simulated by Bloch-McConnell equations with proper assumptions and parameters that mimic realistic tissue conditions. ANNCEST is trained to extract relevant features relating Z-spectra and quantifiable parameters. The neural network is comprised of three layers: an input layer, fully connected hidden layers, and an output layer. The input of the neural network is the intensity of the Z-spectrum at different frequency offsets, and the outputs are the fours quantifiable parameters listed on the left.

Figure 2. Representative PCr maps obtained by 31P 2D MRS and ANNCEST. (a) T2 weighted anatomical image. PCr concentration maps obtained by (b) ANNCEST and (c) 31P 2D MRS during the exercise process. The Z-spectra at baseline (d) and post-exercise (e) extracted from the blue rectangular region shown in (b). (f,g) Bland Altman analysis of PCR concentrations from ANNCEST and 31P 2D MRS (n = 4) for the red ellipsoidal region shown in (a). The red dashed line refers to the fitted curve Y = 0.923X.

Figure 3. Proof-of-principle calculation of the PCr recovery time constant. (a) T2 weighted anatomical image and selected ROI (red circle). (b) The fitting results of the selected ROI indicated in (a). (c) Fitted map corresponding to PCr ANNCEST data shown in Fig. 2. The fitted values within the regions circumscribed by the white line are 70.7 ± 55.4 s (mean ± s.d.), with the large s.d. due to regional variation.

Proc. Intl. Soc. Mag. Reson. Med. 28 (2020)
0343