Angelo Zuffianò1, Bob de Vos1, Jorrit Glastra1, Pim Moeskops1, Valerio Fortunati1, Ivana Išgum2, Tim Leiner3, Carla van Gils3, and Wouter Veldhuis3
1Quantib, Utrecht, Netherlands, 2Biomedical Engineering and Physics, Radiology and Nuclear Medicine, Amsterdam University Medical Center, Amsterdam, Netherlands, 3Radiology, Utrecht University Medical Center, Utrecht, Netherlands
Synopsis
Dynamic contrast enhanced (DCE) MRI is the key series to analyze for the
detection of breast cancer in women with extremely dense breasts. Given the
increasing number of women receiving dense breast MRI screening we aimed to
reduce radiologist workload without reducing the high sensitivity of MRI. We
developed a convolutional neural network (CNN) based method able to defer 8.1%
of the workload by identifying non-enhancing scans with a sensitivity of 96.3%.
Introduction
Dynamic
contrast enhanced (DCE) MRI has the potential to become a standard screening modality
in women with extremely dense breast tissue. The goal of this study is to
investigate the feasibility of using a convolutional neural network (CNN) to recognize
MR image series with a negligible risk of containing lesions, with the aim of
supporting the radiologist in prioritizing the screening workload.Methods
A total of
2211 MR studies of subjects with extremely dense breast tissue (Volpara Density
Grade 4) and a negative result at screening mammography (BIRADS category 1 or
2)1 were analyzed. Fast-DCE images (352
× 352 × 60 voxels with spacing 0.966 × 0.966 × 3.000 mm3) were acquired
on a 3.0T Achieva or Ingenia Philips system at 16 timepoints with an interval
of 5 seconds, and within 90 seconds after contrast injection1. All the acquisitions were
performed in the axial plane with bilateral anatomic coverage, and a 0.1 mL
dose of gadobutrol per kilogram of body weight injected at a rate of 1 mL/sec.
Manual
classification into non-enhancing images, symmetric enhancing images, and images
containing possible lesions was performed by a single expert radiologist (WV)
with 14 years experience reading breast MRIs. The classification was based on an
axial maximum intensity projection (MIP) of the subtraction images between the last
timepoint and the pre-contrast image.
A dilated2 2D CNN with a receptive field of 131 voxels followed by a global pooling layer
was trained to distinguish non-enhancing scans (negative class) from enhancing
scans, i.e. symmetric enhancement or possible lesion (positive class). The
model at the convergence point of the training loss was chosen for the final
evaluation. The performance was evaluated on the test set by performing receiver
operating characteristic (ROC) curve analyses.Results
Automatic classification of the breast MR images
between the non-enhancing class (negative class) and all other classes
(positive class) was achieved with an average inference time below 1 second on a
GPU. ROC analysis showed an area under the curve (AUC) of 0.80. This allows 8.1%
of the workload to be triaged as non-enhancing with a sensitivity of 96.3% when
comparing to the radiology expert labels. Of those studies which were
incorrectly classified as non-enhancing none were found to contain relevant
lesions for cancer detection according to the expert radiologist.Discussion and conclusion
We have
presented a method to quickly triage breast MRIs with a negligible
risk of containing any enhancing lesions relevant to cancer detection, as a
proof of principle for CNN-based screening workload reduction. The CNN can subsequently
be extended to further subclassify the enhancing class by including information
from high spatial resolution and diffusion-weighted images that are acquired in
the protocol as well1. Acknowledgements
We would like to acknowledge the DENSE Study
Group. No funding was obtained for this study, but the data was acquired with
funding from The Netherlands Organization for Health Research and Development
(ZonMW-200320002-UMCU, ZonMW-50-53125-98-014), Bayer Pharmaceuticals
(BSP-DENSE), and the Dutch Cancer Society (KWF-UU-2009-4348).References
- Emaus,
Marleen J., et al. "MR imaging as an additional screening modality for the detection
of breast cancer in women aged 50–75 years with extremely dense breasts: the
DENSE trial study design." Radiology 277.2 (2015): 527-537.
- Fisher Yu and Vladlen Koltun "Multi-Scale
Context Aggregation by Dilated Convolutions", 2015.