Pilar Sango Solanas1, Kevin Tse Ve Koon1, Eric Van Reeth1, Cyrielle Caussy2, and Olivier Beuf1
1Univ Lyon, INSA‐Lyon, Université Claude Bernard Lyon 1, UJM-Saint Etienne, CNRS, Inserm, CREATIS UMR 5220, U1206, F‐69616, Lyon, France, Lyon, France, 2Département d’Endocrinologie, Diabète et Nutrition, Centre Hospitalier Lyon Sud, Hospices Civils de Lyon, CarMeN, INSERM U1060, INRA U1397, Lyon, France, Lyon, France
Synopsis
Magnetic
Resonance Elastography (MRE) is a valuable technique to quantitatively
characterize mechanical properties of tissues based on the properties of shear
waves propagation. In this study, a radial acquisition MRE sequence potentially able to quantify
viscoelastic parameters of tissues whose T2 values are very short is proposed.
To this end, an optimal control-based RF pulse is applied with a constant
gradient during the mechanical excitation to simultaneously perform spatially
selective excitation and motion encoding. Acquisition is started right after, enabling
a very short TE. Results on phantom experiments demonstrated the feasibility of
our ultra-short echo time MRE technique.
Introduction
MRE is conventionally performed by the application of oscillating motion
encoding gradients (MEG) that are able
to encode the spins motion oscillating at a given frequency into the NMR signal
phase1. Usually, several periods of MEG are needed to increase the
phase encoding but this results in a long echo time and thus a degraded SNR. A new encoding strategy of the shear wave propagation,
by simultaneously applying an Optimal Control (OC) RF pulse and a constant
gradient was already demonstrated2 when optimized pulses were
applied in a conventional RARE MRE sequence, achieving echo times of about
10ms.
In order to further reduce the
TE, we propose to create a radial acquisition MRE sequence. For this purpose,
a UTE sequence was adapted by adding specifically designed OC RF pulses.Methods
Optimal
control theory was applied to MRE to design the optimized RF pulses. The
computation is performed with the GRAPE algorithm3. As we know that
the macroscopic magnetization $$$\vec{M}$$$ is governed by
Bloch equations, the OC algorithm provides the RF control parameter to apply in
order to manipulate the isochromats from
the steady state towards a desired target state.
The
RF pulse is simultaneously applied with a constant gradient $$$G$$$ to perform
slice selectivity4 while a shear wave motion at frequency $$$f_e$$$ produces static
field variations given by $$$\Delta B_{0}^{(i,j)}(t)=G(Asin(-2πf_et+θ^{(i)})+z^{(j)})$$$, where $$$z^{(j)}$$$ represents the isochromat (i,j) location in the slice
(Figure 1).
Finally,
different target states are attributed whether the considered isochromat is
located in the passband ($$$Δ_{in}$$$) or in the stopband ($$$Δ_{out}$$$). The isochromats phase is directly linked to the
phase of the wave motion they are experiencing5:
$$\vec{T}^{(i,j)}=\rho(cosΦ^i,sinΦ^i,0)\: if \:j\in Δz_{in}$$ $$\vec{T}^{(i,j)}=\rho(0,0,1)\: if \:j\in Δz_{out}$$
A
UTE readout was experimentally compared to a Turbo Spin Echo using the same OC
RF pulse and a conventional MRE using a similar Turbo Spin Echo through phantom
MRE experiments. For this purpose, a UTE sequence was modified by adding the
optimized pulses dedicated to MRE. Radial acquisitions trajectories starting in
the out-center of the k space were used.
All
the experiments were carried on an agar phantom doped with NiSO4 (0.2% NiSO4,
3.8% agar) with [T1,T2]=[230,45]ms. A piezoelectric actuator (CEDRAT Technologies) was
used as mechanical transducer for motion generation.
MRI measurements were run on a Bruker 4.7T small animal MRI system. For
the OC techniques, the pulse was optimized for an excitation frequency of 400
Hz, a T2=26ms and a duration of 13.8ms. Three different sequences with unchanged
TR and geometry were used: classical RARE MRE, OC RARE and OC UTE (Figure 2).
Acquisitions with (400Hz shear wave) and without mechanical excitation were acquired. Two acquisitions with inversion of the polarity
were always performed for phase images subtraction to remove static phase errors.
The phase to noise ratio PNR is calculated to evaluate and compare the
motion encoding efficacy of the sequences. Since the SNR obtained from
magnitude images cannot be directly used to compare radial and cartesian
acquisitions, a phase method is used to calculate the noise level of the phase
image. We defined the phase encoding $$$∆_{xy}$$$ as the maximal phase
variation encoded in the (x,y) pixel along the temporal (phase offsets)
direction. A ROI of 3600 pixels was defined to establish the limits of the
phantom in the phase image. The PNR was computed as the ratio between the
average value of phase encoding $$$ \bar{\Delta}$$$ obtained when a shear waves is propagating through the phantom
and the phase noise $$$\sigma$$$, calculated as the mean phase encoding in the absence
of mechanical excitation: $$PNR=\frac{\bar{\Delta}}{\sigma}=\frac{ \left(\displaystyle\sum_{(x,y)\in ROI} ∆_{xy} \right)_{MotionON}}{ \left(\displaystyle\sum_{(x,y)\in ROI} ∆_{xy} \right)_{MotionOFF}}$$.Results
Phase images with and without excitation were analyzed. Shear wave phase
images are shown in Figure 3 for each acquisition type. The wave propagation is
perfectly visualized for all of them.
Figure
4 illustrates phase images of the OC UTE method and the respective temporal
phase evolutions with and without excitation.
Figure
5 compares the results of the three presented MRE sequences in terms of $$$\bar{ \Delta}$$$, $$$\sigma$$$ and PNR. The OC RARE sequence produces the
highest value of phase encoding but the OC UTE scheme achieves the lowest value of phase noise while yielding the best PNR. As a
result, despite the difference between phantom’s T2-value and the T2 used for
the pulse optimization, both OC methods present better PNR values compared to the
classical RARE MRE. A gain of 2 in the PNR is
reached when comparing the classical RARE MRE (TE=12.5ms) and the OC UTE (TE=2.4ms)
methods.Conclusion
A new motion encoding
method consisting in appliying OC to MRE with a radial acquisition
readout was demonstrated on phantom experiments. The OC pulse, which
simultaneously performs frequency selective excitation and motion encoding, allows
extremely short echo times yielding the highest PNR values when OC UTE is used.
Future work will
focus on evaluating the OC pulses robustness to the optimization parameters
variation to improve the motion encoding of OC MRE methods. Pre-clinical studies
on mice livers will be also conducted to evaluate the feasibility of the OC UTE
method on in vivo
experiments.Acknowledgements
This work was performed within
the scope of LABEX PRIMES (ANR-11-LABX-0063). Experiments were performed on the
PILoT facility, part of the France Life Imaging infrastructure
(ANR-11-INBS-0006).References
1. Muthupillai R, Lomas D,
Rossman P, Greenleaf J, Manduca A, Ehman R: Magnetic resonance elastography by
direct visualization of propagating acoustic strain waves. Science 1995;
269:1854–1857.
2. P. Sango Solanas et al.,
« Constant Gradient Magnetic Resonance Elastography Experiments on Phantom
and Bovine Liver. » In ISMRM 27th Annual Meeting & Exhibition, 11-16
May 2019 Montréal, QC, Canada; #06831.
3. Khaneja N, Reiss T, Kehlet C, Schulte-Herbrüggen T,
Glaser SJ: Optimal control of coupled spin dynamics: design of NMR pulse
sequences by gradient ascent algorithms. Journal of Magnetic Resonance 2005;
172:296–305.
4. Vinding MS, Maximov II, Tošner Z, Nielsen NChr:
Fast numerical design of spatial-selective rf pulses in MRI using Krotov and
quasi-Newton based optimal control methods. The Journal of Chemical Physics
2012; 137:054203.
5. Lefebvre PM, Van Reeth E, Ratiney H, et al.: Active
control of the spatial MRI phase distribution with optimal control theory.
Journal of Magnetic Resonance 2017; 281:82–93.