Haifeng Wang1, Leslie Ying2, Xin Liu1, Hairong Zheng1, and Dong Liang1
1Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China, 2Department of Biomedical Engineering and Department of Electrical Engineering, The State University of New York, Buffalo, NY, United States
Synopsis
Magnetic
resonance fingerprinting (MRF) is an exceptional promise for simultaneous
quantification of T1 and T2 maps, based on the traditional Bloch equation
formalism of MR and numerous readouts. In this work, a Fractional-order model
of the Bloch equations is applied to create the dictionary of the T1 and T2
maps used in MRF. The simulations show that the proposed method can improve the
evaluation accuracy of the T1 and T2 maps comparing with the conventional MRF
methods with the traditional first-order model of the Bloch simulation.
Introduction
Recently, magnetic resonance fingerprinting (MRF) shows an
exceptional promise for simultaneous quantification of T1 and T2 maps, based on
the traditional Bloch equation formalism and numerous readouts 1.
Though the performance of the MRF acquisitions are similar to modern rapid combined T1 and T2
mapping methods DESPOT1 and DESPOT2 2, the evaluation accuracy of the T1 and T2 maps is still a problem
in MRF 1,3-7. Since now, many schemes have been proposed to
improve the accuracy of the MRF from matching, reconstructions and sequences 3-15, such as SVD compression 3, maximum likelihood 4, Low-Rank (LR) 5-9,
B1 estimation 10, pseudo steady-state free precession (pSSFP) 11,
sliding-window 12, slice profile compensation 13,
multi-frequency interpolation 14, Kalman filter 15, etc. But they are all
based on the first order model of the conventional Bloch equations. It has been
demonstrated that the fractional-order model of the Bloch equations can
describe anomalous NMR or MRI relaxation phenomena (T1 and T2) 16 more accurately. In this work, the fractional-order extension of the Bloch
equations is applied to improve the dictionary accuracy for the T1 and T2 map
evaluations. The simulations illustrate that the proposed method can raise the
accuracy of the T1 and T2 maps higher over 30% than the conventional MRF with the
first-order model of the Bloch equations.Theory and Methods
It is well-known that the Bloch equations are
wildly used to describe the dynamics of motion of macroscopic nuclear
magnetization that can be obtained by summing up all nuclear magnetic moment in
the sample. But, there are many anomalous cases are observed such as stretched-exponential
or power-law behaviour. So it is necessary to look for an alternative model to
describe the mathematical relationship between relaxation processes and
internal material structure. As seen as Fig.1, a fractional-order model for NMR
or MRI relaxation has been proposed by R.L. Magin et. al 16,
which leads to Mittag-Leffler and stretched exponential functions for
time-domain T1 and T2 relaxation. Actually, the fractional-order model has
shown by others to be useful for describing dielectric and viscoelastic
relaxation in complex, heterogeneous materials 16.
To revert to the equivalent differential form for generating the
dictionary in MRF, we applied the fractional derivatives of order α (0<α≤1) and β (0<β≤1) to T2 and T1 relaxations respectively, and obtained
the following form for the fractional-order components of the Bloch equations
in Fig.1. When α and β are both equal to 1, the Mittag-Leffler function is
equivalent to the simple exponential function and the classical expression for
T1 and T2 relaxation emerges. And with small values of the function argument,
the Mittag-Leffler function converges to the stretched exponential function
with the stretching parameters (α and β), as seen in Fig. 1. Therefore, the
conventional Bloch equations in MRF are substituted by the Bloch equations with
the fractional-order model. Here, the acquisition pattern with 850 shots of
variant flip angles (FA), time of repetition
(TR) and time of echo (TE) was used by pSSFP and a
golden-angle radial trajectory with the degree: 111.25° increment is employed
in k-space 11, as seen in Fig. 2. A Shepp-Logan phantom with 5
materials is applied in all of the simulations. The two reconstruction methods
of SVD back projection 3 and LR ADMM
reconstruction 5 were used to solve the MRF reconstruction
problem to estimate T1 and T2 maps.Results
Fig. 3
shows the estimated T1 (a) and T2 (b) maps of MRF with conventional Bloch
equations and the proposed fractional Bloch equations. Here, α and β (0<α≤1, 0<β≤1) in the
proposed equations are respectively equal to 0.5 and 0.9. The average
difference (avg. diff. Δ) maps between the reference maps and estimated T1 or
T2 maps illustrate that the proposed method can reduce over 30% the evaluation errors
of the T1 and T2 map, when α and β of the fractional-order model have
appropriate values.Discussion and Conclusion
In sum, we
applied the fractional-order model into the Bloch equations in MRF, in order to
improve the evaluation accuracy of the T1 and T2 maps. The simulation results
have shown the potential of raising the evaluation accuracy in two types of MRF
reconstruction methods. In the future, in vivo experiments and automatically
setting stretching parameters (α and β) will be studied.Acknowledgements
The
authors thank Dr. Huihui Ye and Chongyu Liao for helpful discussions, and thank
Dr. Jakob Asslaender for his open-source codes. This work was supported in part by the National Natural Science Foundation of China (61471350) and the Science and Technology Program of Guangdong (2015A020214019).References
1. Ma D, Gulani
V, Seiberlich N, Liu K, Sunshine JL, Duerk JL, Griswold MA. Magnetic resonance
fingerprinting. Nature. 2013; 495(7440):187-92.
2. Deoni SCL,
Peters TM, Rutt BK. High-Resolution T1 and T2 Mapping of the Brain in a
Clinically Acceptable Time with DESPOT1 and DESPOT2. Magnetic Resonance in
Medicine. 2005; 53:237-41.
3. McGivney DF,
Pierre E, Ma D, Jiang Y, Saybasili H, Gulani V, Griswold MA.SVD compression for
magnetic resonance fingerprinting in the time domain. IEEE Trans Med Imaging.
2014 Dec;33(12):2311-22.
4. Zhao B,
Setsompop K, Ye H, Cauley SF, Wald LL. Maximum Likelihood Reconstruction for
Magnetic Resonance Fingerprinting. IEEE Trans Med Imaging. 2016
Aug;35(8):1812-23.
5. Asslaender J,
Cloos MA, Knoll F, Sodickson DK, Hennig J, Lattanzi R. Low rank alternating
direction method of multipliers reconstruction for MR fingerprinting. Magn
Reson Med. 2017 Mar 5. doi: 10.1002/mrm.26639.
6. Zhao
B, Setsompop K, Adalsteinsson E, Gagoski B, Ye H, Ma D, Jiang Y, Ellen Grant P,
Griswold MA, Wald LL. Improved magnetic resonance fingerprinting reconstruction
with low-rank and subspace modeling. Magn Reson Med. 2017 Apr 15. doi:
10.1002/mrm.26701.
7. Yang M, Ma D,
Jiang Y, Hamilton J, Seiberlich N, Griswold MA, McGivney D. Low rank
approximation methods for MR fingerprinting with large scale dictionaries. Magn
Reson Med. 2017 Aug 13. doi: 10.1002/mrm.26867.
8. Doneva M,
Amthor T, Koken P, Sommer K, Bornert P. Matrix completion-based reconstruction
for undersampled magnetic resonance fingerprinting data. Magn Reson Imaging.
2017 Sep;41:41-52.
9. Mazor G,
Weizman L, Tal A, Eldar YC. Low rank magnetic resonance fingerprinting. Conf
Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:439-442.
10. Buonincontri
G, Sawiak SJ. MR fingerprinting with simultaneous B1 estimation. Magn Reson
Med. 2016 Oct;76(4):1127-35.
11. Asslander J,
Glaser SJ, Hennig J. Pseudo Steady-State Free Precession for MR-Fingerprinting.
Magn Reson Med. 2017 Mar;77(3):1151-1161.
12. Cao X, Liao
C, Wang Z, Chen Y, Ye H, He H, Zhong J. Robust sliding-window reconstruction
for Accelerating the acquisition of MR fingerprinting. Magn Reson Med. 2017
Oct;78(4):1579-1588.
13. Hong T, Han
D, Kim MO, Kim DH. RF slice profile effects in magnetic resonance
fingerprinting. Magn Reson Imaging. 2017 Sep;41:73-79.
14. Ostenson J,
Robison RK, Zwart NR, Welch EB. Multi-frequency interpolation in spiral
magnetic resonance fingerprinting for correction of off-resonance blurring.
Magn Reson Imaging. 2017 Sep;41:63-72.
15. Zhang X, Zhou
Z, Chen S, Chen S, Li R, Hu X. MR fingerprinting reconstruction with Kalman
filter. Magn Reson Imaging. 2017 Sep;41:53-62.
16. Magin RL, Li W, Pilar Velasco M, Trujillo J,
Reiter DA, Morgenstern A, Spencer RG. Anomalous NMR relaxation in cartilage
matrix components and native cartilage: fractional-order models. J Magn Reson.
2011 Jun; 210(2):184-91.