Hassan Haji-valizadeh1, Bradley D. Allen2, Roberto Sarnari3, Matthew Barrett4, and Daniel Kim2
1Biomedical Engineering, Northwestern University, Evanston, IL, United States, 2Radiology, Northwestern University, Chicago, IL, United States, 3Radiolgy, Northwestern University, Chicago, IL, United States, 4Cardiology, Northwestern University, Chicago, IL, United States
Synopsis
We
sought to develop a compressed sensing reconstruction method for radial k-space derived real-time phase contrast that uses spatially
varying regularization to reduce flickering artifacts without significant loss
in quantified flow accuracy, and evaluate its performance with respect to clinical breath-hold phase contrast in
patients undergoing aortic valve evaluation with cardiovascular MRI.
Introduction
Breath-hold phase-contrast (bh-PC) MRI is a proven
tool for assessment of blood flow and velocity through the great vessels1.
However, as a segmented
acquisition, it may produce poor results in patients with irregular heart rhythm
and/or dyspnea. One approach to address these problems is to perform real-time PC
(rt-PC) MRI, as previously described using radial k-space sampling and
compressed sensing (CS)2. This pulse sequence, however, may produce considerable
image artifacts (e.g., flicker through time) arising from a high data
acceleration rate needed for achieving high temporal resolution (~40 ms). Temporal
filters can be used to minimize aliasing artifacts, but such filters may cause temporal
blurring and reduce velocity values3,4. In this study, we sought to develop a CS reconstruction
method that uses spatially varying regularization to reduce flickering
artifacts without significant loss in accuracy, and evaluate its performance
against clinical bh-PC MRI in patients undergoing aortic valve evaluation with
cardiovascular MRI. Methods
(Patient
Enrollment) We scanned 6 patients (4 females, 2 males,
mean age = 56.2 ± 17.1 years) with rt-PC and clinical bh-PC MRI on a 1.5T
scanner (Siemens, Avanto) to image a plane that is superior to the aortic valve
(i.e., ascending aorta). (Pulse
Sequence) We developed a rt-PC MRI pulse sequence using radial k-space
sampling3 with golden angle ratio = 111.23°5 and
compared its performance against clinical bh-PC MRI (see Table 1 for relevant
imaging parameters). (Image
Reconstruction) The CS reconstruction was performed off-line on a
workstation equipped with MATLAB (R2014a, The MathWorks). For CS reconstruction, after nonuniform fast
Fourier transform6 and self-calibration7 of coil
sensitivity maps, temporal total variation was used as the sparsifying
transform8 with normalized regularization weight (λ)= 0.045
(or 4.5% of maximal signal). Note, the reference and velocity-encoded data were
reconstructed separately. As shown in Figure 1, we explored two different
regularization approaches: static and spatially varying. We adopted a previous
described method9 to automatically derive a spatial mask that
assigns high λ
to locations generating high levels of flickering artifacts arising from the
outer periphery (e.g., chest wall) and moderate levels of flickering artifact arising
from static body tissues such as the liver (Figure 1). Briefly, locations causing
flickering artifacts were detected by first applying a 1D median temporal
filter to standard CS reconstructed magnitude images. The difference between the
median filtered and original images was averaged over time to derive a
normalized threshold value of 0.05 (Figure 1B). To remove flickering artifact arising
from static body tissues, such locations were detected by averaging the phase images
over time to derive a threshold value of 0.3% of velocity encoding (venc)(Figure
1B). We then combined the magnitude and phase masks with empirically derived factors
4 and 2, respectively, to derive a spatial varying λ map. Note,
these empirical factors were derived from training data sets. (Qualitative Assessment) Two cardiologists and one radiologist
graded the artifact level for CS reconstruction with static and spatially
varying λ
on a 5-point Likert
scale (1: worst; 3: clinically acceptable; 5: best).
(Velocity/Flow
Quantification) For each data set, for both bh-PC and
rt-PC MRI, a single region of
interest (ROI) was drawn manually around the ascending aorta at a frame
exhibiting high velocities (i.e., contrast). The ROI was then deformed through
time using the Advanced Normalization Tools (ANTS)10. The rt-PC flow curves from multiple
heat beats were average and compared to bh-PC flow curves using two tailed paired t-test and linear regression and Bland Altman analyses. Results
The mean artifact score for spatially varying λ
was better (3.3 ± 0.8) than that for static λ
(2.6 ± 0.5)(see Figure 2 for an example), where only the spatially varying λ was
deemed clinical acceptable (score
3). Compared with clinical bh-PC, both static
λ and spatially varying λ CS reconstructions produced flow values that were not
significantly different (p>0.05). Figure 3 shows the scatter plots resulting
from the Bland-Altman and linear regression analyses, which indicate that the flow
values are strongly correlated and in good agreement between bh-PC and both CS reconstructions. Conclusion
This study demonstrated a CS reconstruction
method that uses spatially varying λ to reduce flickering artifacts arising
from highly accelerated rt-PC MRI, without significant loss in accuracy. This
reconstruction method produced relatively accurate flow metrics as compared
with clinical bh-PC MRI. Future studies
in a larger patient cohort are warranted to further evaluate the clinical
utility.Acknowledgements
NIH grant: R01HL116895, R01HL138578, R21EB024315, R21AG055954References
1.
Kramer CM,
Barkhausen J, Flamm SD, et al. Standardized cardiovascular magnetic resonance
imaging (CMR) protocols, society for cardiovascular magnetic resonance: board
of trustees task force on standardized protocols. JCMR. 2008; 10(1):35.
2.
Lustig M, Donoho
D, Pauly JM. Sparse MRI: The application of compressed sensing for rapid MR
imaging. MRM. 2007 ;58(6):1182-95.
3.
Joseph A, Kowallick JT, Merboldt KD, et
al. Real‐time flow MRI of the
aorta at a resolution of 40 msec. JMRI. 2014; 40(1):206-13.
4.
Frahm J, Schätz
S, Untenberger M, et al. On the temporal fidelity of nonlinear inverse
reconstructions for real-time MRI–The motion challenge. The Open Medical
Imaging Journal. 2014; 8:1-7.
5. Winkelmann
S, Schaeffter T, Koehler T, et al. An optimal radial profile order based on the
Golden Ratio for time-resolved MRI. IEEE transactions on medical imaging. 2007;
26(1):68-76.
6. Fessler
JA. On NUFFT-based gridding for non-Cartesian MRI. Journal of Magnetic
Resonance. 2007;188(2):191-5
7. Walsh DO, Gmitro AF, Marcellin MW.
Adaptive reconstruction of phased array MR imagery. MRM. 2000;43(5):682-690.
8. Feng L, Grimm
R, Block KT, et al. Golden‐angle radial sparse parallel MRI: Combination of
compressed sensing, parallel imaging, and golden‐angle radial sampling for fast
and flexible dynamic volumetric MRI. MRM. 2014 ;72(3):707-17.
9. Ilicak E, Cetin S, Bulut E, et al.
Targeted vessel reconstruction in non‐contrast‐enhanced steady‐state free precession angiography. NMR in
Biomedicine. 2016; 29(5):532-44.
10. Avants BB, Epstein CL, Grossman M, et al.
Symmetric diffeomorphic image registration with cross-correlation: evaluating
automated labeling of elderly and neurodegenerative brain. Medical image analysis.
2008; 12(1):26-41