Recent findings suggest white matter hyperintensities (WMH) that appear on FLAIR images may play a role in the evolution of Alzheimer’s disease (AD). Here, we developed a novel algorithm that simultaneously detects and locates WMH, based on a FLAIR atlas database and a multi-atlas fusion algorithm. The method showed a respectful WMH detection accuracy. We also investigated region-specific WMH load in participants for whom amyloid imaging and vascular data were available. The results suggested that posterior WMH is related to amyloid deposition; whereas anterior and parietal WMH is associated with vascular risk factors.
Multi-atlas based Detection and Localization (MADL) of WMH: The algorithm pipeline is depicted in Fig. 1. Briefly,
i) A FLAIR atlas library is established, consisting of 14 normal elderly brains that have minimal WMH.
ii) Atlas images are registered to the target image via linear and nonlinear (Large Deformation Diffeomorphic Metric Mapping18) transformations.
iii) Atlas-weighting and fusion is performed according to a multi-atlas likelihood fusion method19 to obtain the posterior probability $$$\widehat{p}\left(j|x,I_{T}\right)$$$—the probability of voxel $$$x$$$ in target image $$$I_{T}$$$ to be labeled as $$$j$$$.
iv) A final segmentation is obtained using Bayes maximum a posteriori (MAP) estimation: $$$L_{T}(x)=\arg_{max(j\in[1,...,L])}\widehat{p}\left(j|x,I_{T}\right)$$$, and a 3D MAP profile $$$\widehat{p}\left(L_{T}|x,I_{T}\right)$$$ is obtained.
v) WMH is identified as voxels with low $$$\widehat{p}\left(L_{T}|x,I_{T}\right)$$$ values below certain threshold within a WM mask, along with several post-processing steps to reduce false-positives.
Based on the simultaneous outputs of image segmentation and WMH detection, region-specific WMH load in each ROI can be extracted. Algorithm performance was evaluated by inter-class correlation (ICC), receiver-operation curve (ROC), dice similarity index (SI), false-positive rate (FPR), and false-negative rate (FNR).
Data: MRI, PET, diagnostic and clinical data were collected from the BIOCARD cohort20 —an ongoing longitudinal study focused on preclinical AD. All analyses presented here are cross-sectional. FLAIR data were acquired on a Philips Achieva 3.0T scanner at TI/TE/TR = 2800/100/11000ms, in-plane resolution = 1 x 1mm, 69 slices with slice-thickness = 2mm. 171 FLAIR images were used in this study, and manual delineation of WMH was performed on 124 images. Amyloid deposition was determined by PET-PiB distribution volume ratio (DVR), generated using cerebellar gray matter as a reference tissue21. Five vascular risk factors were used in the analysis, including hypertension, hypercholesterolemia, diabetes, smoking, and body mass index. At the time of data acquisition, all participants were either cognitively normal (n=117) or had a consensus diagnosis of MCI (n=54) based on the NIA/AA criteria.
Whole-brain WMH load detected by the MADL method correlated well with manual results with an ICC of 0.97 across 124 subjects, and ICC was 0.89 in a sub-population with WMH load < 20ml (Fig. 1A). Voxelwise ROC were calculated for individual subjects, and the average ROC and the standard deviation is plotted in Fig. 1C, and the area under ROC was 0.89±0.05. We compared the performance of MADL with a state-of-the-art WMH detection algorithm22 in Table 1. Overall, SI and ICC was similar between the two methods; MADL had a lower FPR while BIANCA had a lower FNR.
Fig. 3A shows a FLAIR image from a MCI subject, overlaid with segmentation and WMH detection results from the MADL pipeline. We grouped the participants according to their amyloid deposition levels, and significant differences in WMH load were found in the bilateral occipital WM and inferior DPWM among all 38 WM ROIs, in addition to the whole-brain WMH load (Fig. 3B). To investigate vascular risk factors, we stratified the participants into six groups based on the number of vascular risk factors for each subject (on the level of 0-5). Significant differences among the risk groups were found in the bilateral parietal WM and anterior DPWM, right frontal lobe, and whole-brain WMH load (Fig. 4).
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