Shivaprasad Ashok Chikop1, Amaresha Shridhar Konar1, Nithin Vajuvalli1, Ramesh Venkatesan2, and Sairam Geethanath1,3
1Medical Imaging Research Centre, Dayananda Sagar Institutions, Bangalore, India, 2Healthcare, Wipro-GE, bangalore, India, 3Department of Radiology, Columbia University Medical Centre, New Y0rk, NY, United States
Synopsis
An
integrated cardiac phantom solution was developed to correlate with clinically
relevant parameters entered through a user interface (UI). Mimicking of human
heart was achieved through integration of a flexible 3D printed heart model and
peristaltic pump. Results depict the correlation between the input parameters
to output parameters obtained through image processing of the phantom MR images.
The work illustrates the structural features and motion measures of the cardiac
phantom. The phantom can therefore be employed to assess novel acquisition and
reconstruction methods. The utilization of 3D printing enables the use of subject
specific phantom to study diverse cardiovascular scenarios.
Purpose/Introduction
In
vitro cardiac phantoms play a critical role in the assessment of newly
developed pulse sequence and reconstruction techniques1, in addition
to understanding of the pathophysiology2. The goal of this work was
to develop an integrated, cost effective cardiac phantom solution that
correlates user provided parameters with measures from the resulting MR images.
The utilization of 3D printing allows subject specific phantom models to study
diverse cardiovascular scenarios. The
details of the 3D printing have been reported previously3. In
comparison, the phantom and the solution described here are hollow and integrated
with post-processing of MR images depicting quantification of motion extent and
correlation to clinical parameters such as beats per minute and flow rate.Methods
Phantom solution:
The phantom was printed
using Ninjaflex material (J Group Robotics) .The support material
was removed carefully to provide anatomically accurate details for imaging. The
phantom was covered with a layer of water resistant glue to ensure that there
was no leakage. The peristaltic pump was customized with two motors that caused
the motion in the phantom. The pump was interfaced to a laptop through a RS232
cable to vary the input parameters. The software model of the heart4
and the resulting 3D printed heart are shown in figure 1(a, b). The table shown
in figure 1c details the components utilized for the assembly of the phantom
solution along with associated costs and sources. The UI designed in MATLAB (The
Mathworks Inc., MA) allowed inputs of
Beats Per Minute (BPM) and flow rate. The input parameters were converted to
flow rates and fed to the pumps by
employing equations (1,2) as in ref3 . Two pipes were used for
pumping water into the phantom from the water source. The pipes were inserted
into the printed phantom till the ventricles to ensure the effective forward
and reverse flow of water with respect to the pump. The printed heart model is
housed in the cylindrical container. The setup of the phantom for imaging is as
depicted in the figure 2.
Acquisition:
Five cardiac phantom MR datasets
were acquired with different combinations of BPM and flow rates on a GE 1.5T MR450W
scanner. BPM was varied between 40-60 in steps of 10 and flow rate of 3500-4500
ml/min varied in steps of 500. The acquisition parameters for the structural
scan of the phantom were TE/TR=10/540ms, slice thickness with 4mm. Fast Imaging
Employing Steady State Aquisition based cardiac cine sequence with TE/TR=
3.22/6.9ms, 8 slices with slice thickness of 4.3mm was acquired.
Image processing: The Region of Interests
(ROIs) were drawn to measure the perimeter of the inner wall diameter of the
phantom. ROI was drawn utilizing ImageJ software5 for all the
datasets. The perimeter for each of the
ROI was tabulated and compared across different frames of the acquisition. This
was performed on data sets with varying BPM and flow rates to evaluate the
affect of these parameters on the difference in perimeters of the ROI due to
motion.Results
The anatomical details of the printed
phantom are shown in figure 3 from apex of the heart towards aortic region.
Variation in the contrast of the water in container is due to the sensitivity
of the coil used for imaging. The representative data to demonstrate the motion
of the wall is as depicted in figure 4. The red arrows in the figure 4 points
at the corresponding region of maximum motion. The results show increase in the
perimeter of the ROI and also the extent of motion for a maximum flow rate of
4500 ml/min and varying the BPM in UI. There is a decrease in the perimeter for
constant BPM of 50 and a decrease in flow rate from 4500-3500ml/min in steps of
500 ml/min. The results show there is a correlation between the input
parameters in UI to those of the parameters obtained after processing of images.Discussion and Conclusion
The
cardiac phantom is controlled through a User Interface (UI) with clinical
parameters as input3. Beats per minute and flow rate are considered
as the two parameters for the study. Parameters were extracted through image
processing techniques to find the correlation between the input parameters to
that of parameters obtained through image processing. The maximum extent of
motion measured was in case of the 60 BPM and maximum flow rate of 4500 ml/min
as expected. Imperfections on the surface of the printed cardiac phantom due to
the limitation of the available models and printing resolution, may prohibit
the study of CMR angiography. Acknowledgements
1. This work was
supported by Vision Group on Science and Technology (VGST), Govt. of Karnataka,
Karnataka Fund for strengthening infrastructure(KFIST),
GRD#333/2015
2. Department of Science
and Technology (DST), Govt. of India under the program Technology Systems
Development (TSD) for the project “Novel
acquisition and
reconstruction strategies to accelerate magnetic resonance imaging using
compressed sensing”, No: DST/TSG/NTS/2013/100-G.
3. Department of
Information Technology (DIT), Govt. of India for the project "Indigenous -
Magnetic Resonance Imaging (I-MRI)- A national Mission"
References
1. Keenan, Katy, et al. "Standardized phantoms for
quantitative cardiac MRI." Journal of Cardiovascular Magnetic
Resonance 17.1 (2015): W36.
2.
Ersoy, M., et al. "A left ventricular motion phantom for cardiac
MRI." Proc. Intl. Soc. Mag. Reson. Med. Vol. 19. 2011.
3.
Shivaprasad Ashok Chikop et al., “A
cost-effective 3D printed cardiac MR phantom” Proc. Intl. Soc. Mag. Reson. Med. 25 (2017)
4.
https://www.thingiverse.com/
5.
https://imagej.nih.gov/ij/