The relationship between structural and functional brain connectivity across the mammalian lifespan is largely unknown. To elucidate the temporal characteristics of this relationship we longitudinally acquired high-field resting-state fMRI and diffusion-MRI in rats, from early infancy to old age. We specifically examined the interhemispheric connectivity between homologous primary somatosensory cortices, a major part of the sensorimotor system. The structure-function correlation increased from about 0 during infancy to 0.4 around adulthood, followed by a further gradual increase towards old age. This reflects dynamic patterns of lifelong brain remodeling, which may underlie variations in brain disease etiology during development and ageing.
Serial MRI measurements were conducted on a 4.7T horizontal bore Varian MR System. Wistar rats (N=20) were scanned at post-natal days (P)25, 32, 46, 88, 123, 158, 200, 284, 760 and 880. MRI was performed under 1.0-1.5% isoflurane anesthesia in a 2/1 O2/air mixture. During MRI, body temperature was maintained at 37.0 ± 0.5 °C, and blood oxygen saturation, heart rate and expired CO2 were continuously monitored. Anatomical images were acquired with a 3D gradient-echo sequence (TR/TE=6/2.5 ms; 40° flip angle; 100x80x160 matrix; FOV=25x20x40 mm3). Resting-state fMRI (rs-fMRI) was performed using a T2*-weighted 1-shot 3D gradient-echo EPI sequence (TR/TE=32/19 ms; 12° flip angle; 48x32x64 matrix; 0.5x0.5x0.5 mm3 voxels; 600 BOLD images). Diffusion-weighted MRI was performed with a 5-shot EPI-2D sequence (TR/TE=1750/28.52 ms, 19 slices; 4 b0 images, 4 b-values (650, 1285, 1919, 2518 s/mm2; δ/Δ = 5/10 ms), 30 directions per b-value, three averages; 128x128x19 matrix; 0.195x0.195x1.0 mm3 voxels). Brain extraction, data quality checking and registration to a 3D model of the Paxinos & Watson rat brain atlas were all performed in FSL.
Functional connectivity: rs-fMRI pre-processing included motion correction, subsequent regression of motion parameters and band-pass filtering (0.01 < f < 0.1 Hz). The FC strength between the left and right forelimb regions of S1 (S1FL) was calculated as the Fisher’s Z-transformed correlation coefficient.
Structural connectivity: motion and eddy current correction of diffusion-weighted images and tractograms were performed in MRtrix3. Diffusion parameters, fractional anisotropy (FA), mean diffusivity (MD), axial diffusivity (AD) and radial diffusivity (RD) were determined with DTIFIT in FSL. Conventional diffusion tensor-based tractography was applied to generate 250.000 streamlines at whole-brain level (step-size: 25 µm, angle threshold: 45°, FA threshold: 0.25). White matter tracts connecting the left and right S1FL were extracted based on atlas coordinates and a white matter mask. Subsequently, along-tract analysis was performed to calculate the average FA, MD, AD and RD across streamlines. SIFT2 was used to determine the structural connectivity strength.
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