The tissue composition of the brain can be related to different contrast sources in quantitative MRI. Notably, T1 and T2* strongly correlate with myelin and iron. However, other components may play a role in contrast generation. In particular, the hyaluronan component of the extracellular matrix has been recently proposed as a possible important contributor to MRI contrast. Here, we quantify the bulk contribution of hyaluronan to quantitative relaxation maps. This is obtained by characterizing the evolution of the relevant MRI parameters over time during the enzymatic digestion of the hyaluronan.
The hyaluronan component of the ECM in nervous tissue can be effectively removed by enzymatic digestion, which is believed to disassemble the macromolecular scaffold of the ECM, as shown in Fig.1.
To study the MRI effects of the hyaluronan removal, two post-mortem samples ($$$\approx40×20×5\mathrm{mm^3}$$$), obtained by splitting a specimen from the halamus of a deceased male donor (age: 49, cause-of-death: heart failure, no neuropathological abnormalities), were fixed with $$$4\;\mathrm{\%}$$$ ParaFormAldehyde (PFA) for 6 weeks and later stored in a $$$0.1\;\mathrm{M}$$$, pH $$$7.4$$$ phosphate-buffered saline (PBS) solution at $$$4\;\mathrm{°C}$$$. The two samples where arranged in two separate half-spherical sealed containers that were bundled together for the measurements. One sample was treated with with hyaluronidase from bovine testis (Sigma H3884), with up to $$$\approx{}4500\;\mathrm{units/ml}$$$, while the other one was used as control. Both samples were kept at $$$37\;\mathrm{°C}$$$ for $$$\approx{}7\;\mathrm{weeks}$$$, while being temporarily brought to room temperature (almost) daily for $$$\approx{}3\;\mathrm{hours}$$$ during the MRI measurements. Images were acquired using a MAGNETOM 7T (Siemens, Erlangen, Germany) and a circularly-polarized Rx/Tx cross coil for small samples. During each session, quantitative $$$T_1$$$ and $$$T_2^*$$$ 3D maps ($$$330\;\mathrm{\mu{}m}$$$ isotropic) were recorded using MP2RAGE and multi-echo FLASH, respectively.
Results were assessed by computing the volume mean value over the sample during the treatment. Additionally, to verify the effectiveness of the digestion, the two samples were sliced and stained for hyaluronan (with bHABP).
Examples of $$$T_1$$$ and $$$T_2^*$$$ maps acquired at the beginning and at the end of the enzymatic digestions are shown in Fig.2. The evolution of the mean values over time for both contrast in the two samples and their difference is reported in Fig.3, where a chaotic pattern is observed.
The same data after a moving-average over the time dimension with a window of 11 data points (corresponding to approximately 14 days) is shown in Fig.4, where a variation in the $$$T_1$$$ and $$$T_2^*$$$ values at the two ends of the time-line is observed. The images of the hyaluronan staining reported in Fig.5 indicate that the digestion was very effective, whereas substantial amounts of hyaluronan were still present in the control specimen.
We would like to thank the following people for insightful discussions: Henrik Marschner, Tobias Streubel, Stefan Geyer, Katja Reimann, Andreas Schäfer, Evgeniya Kirilina and Nikolaus Weiskopf.
Funded by: EU through the 'HiMR' Marie Curie ITN (FP7-PEOPLE-2012-ITN-316716), the Max Planck Society through IMPRS NeuroCom, the Helmholtz Alliance 'ICEMED - Imaging and Curing Environmental Metabolic Diseases', the German Research Foundation (SPP 1608 Mo2249/2-1), the EU-COST Action BM1001, the Alzheimer Forschungsinitiative e.V. (AFI #11861) and the Federal State of Saxony.
Fig.1: Diagram of the potential hyaluronan-based ECM configuration.
The ECM of brain tissues is composed primarily of hyaluronan polymer chains anchored to the membrane of the cells and provides a scaffold for proteoglycans and other specialized structures that have a strong negative charge and are believed to determine its physiological function12,13. The possible molecular arrangement of the ECM is shown before (PRE) and after (POST) the enzymatic digestion.
Fig.2: Relaxation maps before (PRE) and after (POST) the hyaluronan removal.
Results for $$$T_1$$$ and $$$T_2^*$$$ are reported for both the two samples (digested and control). It is difficult to assess visually the effects of the enzymatic hyaluronan removal by examining a single image (randomly selected). The PRE images correspond to 1 day before starting while, the POST images refer to 42 days after the beginning of the digestion. Note that $$$B_1^+$$$ and $$$B_0$$$ variations due to shimming and other scanner adjustments may have an effect on the observed relaxation values.
Fig.3: Time series of the relaxation values.
The reported values were average over the entire sample volume. The area around the curve indicates the volume standard deviation. Results for $$$T_1$$$ and $$$T_2^*$$$ are reported for both the two samples (digested and control) and their difference. The trend over time, accompanying the enzymatic digestion process, is unclear. Some data for which the automatic registration procedure failed were removed. The beginning of the enzymatic digestion is marked in red, while yellow lines indicate the time points at which new enzymes were introduced (to ensure high enzymatic activity).
Fig.4: Moving average over time of the time series of the relaxation values.
The area around the curve indicated the moving standard deviation with the same window as the moving average. The values of the digested sample do decrease over time with respect to the control and this change is attributed to the enzymatic digestion of the hyaluronan. A time window of 11 points, corresponding to approximately 14 days, has been chosen. This is the minimal value for which the moving standard deviation was visually approximately constant for most data points.
Fig.5: Optical staining for Hyaluronan in the digested and control samples.
The heterogeneous distribution of the hyaluronan and the typical abundance in the labeled Regions-Of-Interest (ROIs) can be inferred from the control, while the image of the digested sample indicate the effectiveness of the hyaluronan removal. The indicated ROIs for the Thalamus region are: STR: striatum, CN: caudate nucleus, CI: internal capsule, CP: cerebral peduncle, STN: subthalamic nucleus, ZI: zona incerta, MB: mamillary body. Within the Thalamus, in green, we indicated: VP: ventroposterior part, MD: mediodorsal part, CM: centromedian part, RT: reticular thalamic nucleus.