Linking the dynamics of neural circuits to behavior is arguably a central theme in neuroscience. fMRI in rodent animals offers the opportunity to combine systems-level brain readout with modern in-vivo cell biology tools, such as DREADDS and optogenetics, to dissect circuit dynamics. Despite efforts to image awake rodents to avoid confounds from anesthesia, there has been no report on fMRI of rodent animals being actively engaged in a goal-directed behavior. We report a method that permits fMRI of brain dynamics while a mouse is actively self-administering optogenetic stimulation, opening the door to real-time imaging of animal behavior using MRI.
Under isoflurane
anesthesia, 14 C57BL/6J mice weighing 25-35g received microinjection of
pAAV1-hSyn-hChR2(H143R)-EYFP viral construct into the infralimbic cortex.
Another group of mice (n=7) received microinjection of viral construct
pAAV-hSyn-EYFP to serve as control. An optic fiber (200 µm core ID) was
chronically implanted. A head fixing post (4.5mm in diameter and 20mm in
length) was implanted on mouse skull. After 1 week of surgical recovery,
each mouse received a set of 3-phase trainings: Phase I: mice were trained to
walk/rest on a custom-made, MRI-compatible treadmill using a restricted water
access schedule. The treadmill had no external motor, and was directly moved by
the animal. Animals learned to lick for sucrose spout while remaining head-fixed,
which broke a customized red-light beam, triggering the reward (10% sucrose)
delivery. Phase II: mice were trained to learn the association between a light
cue and the availability of the reward, and to lick a spout for optogenetic
stimulation during Cue ON, but not Cue OFF. Phase III, animals were trained to
accommodate to the MRI noise inside a customized mock scanner. The entire
training took 3-4 weeks. The MRI-compatible treadmill, Cue control, reward
delivery, animal behavior (self-stimulation) monitoring, MR coil holder, mock
scanner etc were all developed in the lab.
MRI scans were performed
on a Bruker 9.4T scanner using a volume coil (86mm ID) for RF transmit and a
2cm surface coil for MR signal reception. fMRI data were acquired using a
single-shot gradient-recalled EPI sequence (FOV = 25x15 mm, matrix size =
96x58, TR = 1 s, TE = 15 ms, 15 slices with a slice thickness of 0.6 mm, number
of repetitions = 640). Reverse k-space trajectory was implemented on the
scanner to correct for geometric distortion in EPI images. Each scan session
last for no more than 45 min. Images from individual animals were co-registered
into a common space. fMRI data were analyzed using an event-related design in
AFNI. Excessive motion artifacts were removed with 3dDespike. Deconvolution was
applied with the dynamic reward-seeking data (lick-induced light beam-break) as
the input function, and the 6 rigid-body motion parameters from 3dvolreg as the
nuisance signal. BOLD response across animals were subject to t-test against 0
to derive the group activation maps.
We demonstrate the feasibility of fMRI of brain dynamics while a mouse actively self-administered optogenetic stimulation. Conceptually our method has its root in positive reinforcement training, associative learning and decision making in the field of optical imaging and electrophysiology 9, 10. Problems unique to fMRI include limited bore clearance, noisy imaging environment, motion artifacts, and susceptibility induced image distortion and signal loss from implants. The thrust of this work lies in 1) a new awake MRI method; 2) more importantly a shift in imaging paradigm: animals were actively performing the task, instead of passively receiving a task, allowing for causative imaging of brain –behavior mechanisms in real time, rather than post training correlation of previous training/interventions. Our method can be readily applied to brain imaging (including PET) of many rodent disease models; it can also be applied to multimodal neurovascular coupling investigation (e.g. fMRI, optical imaging, electrophysiology etc).
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