In this study provides validation procedure for DSI anisotropy measures versus the histological analysis of the aligned tongue muscles. A fresh ex-vivo sample of the tongue is scanned using DSI multi-shell acquisition then the sample is fixed for further histological analysis and comparison with the fiber tracts using DSI reconstruction. The DSI delineation of muscle fibers is matching the histology images of the same region.
MR acquisition and reconstruction
Diffusion imaging was performed on a post-mortem tongue of a 68-year-old female, around 48 hours after death. The diffusion images were acquired on a Siemens Prismafit scanner using a Readout-Segmented Echo-Planar diffusion sequence (RESOLVE). TE=79 ms, and TR=6250 ms. A diffusion spectrum imaging scheme was used, and a total of 218 diffusion sampling were acquired. The maximum b-value was 4000 s/mm2. The in-plane resolution was 2.5 mm. The slice thickness was 2.5 mm. The diffusion data were reconstructed using diffusion spectrum imaging [4] with a Hanning filter of 16. Diffusion ODF decomposition [5] was conducted using a decomposition fraction of 0.05.
Preprocessing, histology and ST analysis
The whole head was first perfused through carotid aorta then immersed in a fixative solution with 3.7%-4.0% formaldehyde in phosphate-buffered saline for three weeks before excision of the tongue. The tongue was then excised using the “mandibular swing” surgical approach for further histological analysis. T2W images were acquired of the excised tongue placed in a container filled with Flourinert (3 M, St. Paul, MN), which is a proton-free solution, for enhanced contrast. Two sagittal sections of the tongue (aligned with the imaging plane) were carefully dissected out from the tongue specimen (as illustrated in Fig. 1), and then subsequently sent for histology processing. Ten full face 5 micron slices were cut every 500 microns and were stained with H & E stain and then digitized using Aperio slide digitizer at 20x magnification. Structure Tensor (ST) analysis was performed on the 5x H&E digitized images of the two slices, using the freely available Structure Tensor toolbox [6] [7] that works with Matlab. DSI studio [8] was used to process the DSI data.
The work is supported by grant NIH/NIDCD R01 DC014717.
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[8] "http://dsi-studio.labsolver.org," [Online].