Chu-Yu Lee1, In-Young Choi1,2,3, and Phil Lee1,3
1Hoglund Brain Imaging Center, University of Kansas Medical Center, Kansas City, KS, United States, 2Department of Neurology, University of Kansas Medical Center, Kansas City, KS, United States, 3Department of Molecular & Integrative Physiology, University of Kansas Medical Center, Kansas City, KS, United States
Synopsis
Data acquisitions for magnetic
resonance spectroscopic imaging (MRSI) require a long scan time to increase SNR
and for spatial encoding. During the prolonged scan time, maintaining a
constant static magnetic field (B0) is important for a robust MRSI measurement.
However, frequency drifts occur over time even in advanced MR systems and become
larger when high shim currents or rapidly switched gradients are applied. The
frequency drift causes broad and distorted spectral
lineshapes, reduced SNR, and quantification errors. These effects can be
mitigated retrospectively and prospectively. However, in MRSI measurements,
these effects can only be mitigated using the prospective frequency correction,
because each spectrum is phase-encoded. The prospective frequency correction is
typically achieved by incorporating a PRESS-based interleaved reference scan (PRESS-IRS)
as a navigator, termed as PRESS-IRS navigator. A small excitation flip angle
(10-20°) is used for the PRESS-IRS navigator to reduce the saturation-induced
SNR loss on metabolite signals. Nonetheless, the SNR loss remains unavoidable and
becomes notable when the imperfect refocusing pulses or a short repetition time
(TR) are used in MRSI. In this study, a new prospective frequency correction
method is introduced. The new method
utilizes the outer volume suppression-localized navigator, termed OVS-localized
navigator, resulting in no perturbations of metabolite signals and thus no saturation-induced
SNR losses. Meanwhile, a precise measurement of the frequency drift and the
effective correction is achieved. The presented method was demonstrated in
two-dimensional (2-D) MRSI measurements under the large frequency drift induced
by a fMRI experiment.
PURPOSE
Data acquisitions for magnetic
resonance spectroscopic imaging (MRSI) are sensitive to frequency drifts during
the relatively long scan time to increase SNR for low concentrations of
metabolites and for spatial encoding. Significant
frequency drifts occur when high shim
currents or rapidly switched gradients are applied even in advanced MR systems.
1 The frequency drifts cause broad
and distorted spectral lineshapes, reduced SNR, quantification errors, and
errors in spatial encoding. 2-12 Although these effects can be
mitigated retrospectively, prospective frequency correction methods are more
appropriate for MRSI because MRSI lacks identifiable reference MRS signals due
to phase-encoding. 2,6,8 The prospective frequency correction is typically
achieved by incorporating a PRESS-based interleaved reference scan (PRESS-IRS) as
a navigator. 4,6,8 Small flip angle (10-20°) excitation pulses 4,6,8
are generally used for the PRESS-IRS navigator to reduce the saturation-induced
SNR loss on metabolite signals. Nonetheless, the SNR loss remains unavoidable and
becomes notable with the imperfect refocusing pulses or a short repetition time
(TR). In this study, we introduce a new prospective frequency correction method
with a navigator that uses
outer volume suppression (OVS)-localization and selective water excitation,
which overcomes major shortcomings of previous methods. METHODS
The
proposed OVS-localized navigator method incorporates a navigator acquisition with
the OVS localization 13,14 and selective water excitation into the
MRSI data acquisition (Fig. 1). The OVS localization was adjusted to match the
volume localization in PRESS MRSI. The localized water signal was acquired and sent
to the real-time reconstruction system, where the peak position of the water signal
was used to determine the frequency drift. The measured frequency drift was then
used to prospectively update the frequencies of the RF pulses and the receiver
for data acquisition at the next acquisition. The OVS-localized navigator method
was developed and integrated into a semi-LASER based single-voxel MRS and 2D
MRSI sequences 15 on a 3 T scanner (Skyra, Siemens, Erlangen,
Germany). To examine the effectiveness
of our proposed method, the PRESS-IRS navigator method with an excitation flip
angle of 15° was also implemented in the single-voxel MRS sequence. At the first
experiment, the OVS-localized navigator method was compared with the PRESS-IRS
navigator method with and without a navigator acquisition for the SNR. The SNR comparisons
were performed using the single-voxel MRS measurements on a phantom containing solutions
of acetate and lactate. The experiment was repeated five times. The SNR
differences were assessed using the two-sample t-test with a significance level
p = 0.05. At the second experiment, the OVS-localized navigator method was
demonstrated in 2-D MRSI measurements following a 50-min fMRI experiment to
create realistic gradient heating-induced frequency drifts. The experiment was
performed on a healthy volunteer and a phantom containing solutions of acetate
and lactate. Parameters for the 2-D MRSI sequence were: FOV = 20×20 cm2, thickness = 2 cm, VOI = 10×10 cm2
in a phantom and 9×9 cm2 in humans, 16×16 phase encodings,
TE/TR = 35/1700 ms, and bandwidth = 2000 Hz.RESULTS
The SNR using the OVS-localized navigator method
showed no statistical differences compared to the SNR without the navigator (p
= 0.55-0.95) (Fig. 2a). The SNR
differences were less than 1 % across TRs (Fig. 2b). However, the SNR using the
IRS-PRESS navigator method was significantly lower than the SNR without the
navigator (p = 1.5 × 10-4-3.5
×10-6). The saturation-induced SNR losses were 9.7-13.7% and became
more notable at a shorter TR. In phantom and human MRSI measurements (Figs. 3
and 4), the fMRI experiment-induced frequency drifts were similar with the rate
of approximately -4.5 and -4.1 Hz/min and the maximums of -23.5 and -21.5 Hz,
respectively. The measured frequency drifts in the human brain showed a larger fluctuation than in the phantom, which may be
due to physiological motions and increased uncertainties in determining the
peak position in the human. The frequency drifts
resulted in broad and distorted lineshapes of MRSI spectra
(Figs. 3 and 4). By using the OVS-localized navigator method, the maximal
frequency drift was reduced to -1.5 Hz, and the effects of frequency drifts
were notably reduced. Thus, the spectra acquired with the frequency correction
showed enhanced linewidths and better-defined metabolite signals, including sharper
acetate and lactate peaks in the phantom, and NAA, creatine,
glutamate/glutamine and choline peaks in the human. Acknowledgements
No acknowledgement found.References
No reference found.