Measuring in vivo blood perfusion within the brown adipose tissue depot of the human supraclavicular fossa is highly relevant in metabolic and obesity research. DW-MRS can probe perfusion properties by measuring the IVIM signal of the water peak. However, DW-MRS of the supraclavicular fossa remains a challenging task due the high sensitivity of the region to motion and the associated poor spectral quality. The present work proposes a DW-MRS methodology with a flow compensated acquisition combining cardiac and respiratory tracking to improve spectral quality. IVIM results for the water peak are shown for the first time in the supraclavicular fossa.
Pulse sequence:
DW STEAM MRS schemes were built without and with flow compensation (FC). Both modules were based on a standard STEAM sequence with additional gradients after the first and third RF pulse to induce diffusion weighting (Fig. 1). For the FC version a velocity compensated bipolar gradient scheme was applied. The polarity of the gradients was switched for half of the averages to compensate for eddy-current effects6.
In-vivo experiment:
The supraclavicular fossa of two healthy subjects was scanned using a 3T system (Ingenia, Philips Healthcare) with a 16-channel anterior coil, a 12-channel posterior coil and a 16-channels head coil. Dixon-based fat fraction maps were used to localize the MRS voxel in the supraclavicular fossa (Figs. 2a and 2b). The sequence parameters were TR=2 heartbeats (was equivalent to 2000ms), TE (non FC)=34ms, TE (FC)=63ms, TM=16ms, voxel size=10x10x8mm3, BW=5000, NSA=32, scan duration=approx 11:00min and b-values=1-20-40-60-100-150-200-300-400-600s/mm2. To minimize the effects of physiological motion cardiac triggering with a ECG module (trigger delay=400ms) and respiratory gating with navigator echoes at the diaphragm was applied (Fig.2c). Measurements were performed without FC, with FC and with FC and cardiac triggering. Navigator positions were acquired before every TR to exclude certain averages in the post-processing.
Post-processing:
The preprocessing (Fig.2d) of the spectra included zero order phasing, gaussian apodization and frequency allignment of single acquisitions. With respiratory gating single averages were excluded when the navigator position was outside the pre-defined navigator gating window of 6mm. The mean spectra of the remaining averages was taken and corrected for eddy current phase6. A peak area quantification was performed considering eight fat peaks6.
Spectral quality assessment:
Given the low diffusion coefficient of fat7, the methylene signal should stay constant at this low b-value range. Therefore, the stability (standard deviation of the fitted peak area) of the methylene signal at 1.33ppm of acquisitions measured with different b-values was used to quantify the spectral quality.
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