The resonance frequencies of tissue metabolite are affected by cellular-level variations in magnetic susceptibility and the compartmentation of each metabolite. One prominent finding for 1H MRS studies of the brain is differences of the N-Acetylaspartate (NAA) resonance frequency in white matter, which is hypothesized to reflect the inter-axonal localization of this metabolite and susceptibility variations that are dependent on the orientation of the major axonal bundles relative to the applied magnetic field. In this study, the dependence of the NAA frequency on axonal orientation was evaluated using voxel-based analysis of a whole-brain MRSI and diffusion-tensor imaging.
Volumetric brain MRSI (TE=70 ms), and DTI data (TE=80 ms, 12 directions with b=1000 s/mm2,) were obtained for 20 healthy subjects. The MRSI reconstruction included spectral analysis of the singlet resonances for NAA, Cre, and Cho, with measurement of individual resonance frequencies. All maps were then spatially registered using non-linear spatial transformation 5 at 1 mm isotropic resolution, which used the reference brain corresponding to the Type II white-matter tract atlas 6. Maps of the mean value across all subjects for each of the metabolite resonance frequencies were then generated using a spectral quality filter to exclude voxels with a spectral linewidth greater than 8 Hz. Maps of the mean frequency differences were then generated for NAA and Creatine, ΔNAA-Cre, NAA and Cho, ΔNAA-Cho, and Cre and Cho, ΔCre-Cho.
DTI data were reconstructed using DTIStudio 7. The diffusion tensor was then spatially normalized using LDDMM 8 using the reference MRI for the Type II white-matter tract atlas at 1 mm isotropic resolution 6, and the principal eigenvector, v1, and corresponding color maps representing the diffusion orientation were calculated in atlas space. A map of the angle of v1 relative to the applied B0 magnetic field, θ(x,y,z), was then calculated, with values from 0o (parallel to B0) to 90o (perpendicular to B0). This map was then averaged across all subjects to obtain the mean value of this angle, θ’, in addition to obtaining the mean value of the diffusion direction color map generated from v1. Maps of the metabolite frequency difference and the angle of the primary diffusion vector to the B0 field were then visually compared and locations of notable features identified from the white-matter tract atlas.
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Images are shown for two axial slices (rows i and ii) and a coronal section (row iii) for: a) the mean DTI color map; b) mean ΔNAA-Cho; c) the mean value of the angle of the principal diffusion vector to the B0, for which darker values are oriented closer to the direction of the B0; and d) the reference MRI used for spatial normalization. Blue and green arrows mark the same regions on images within each row.