Functional magnetic resonance imaging has been widely used in measuring functional connectivity between cortical regions, but it has not been well-established in white matter to date. While we have previously demonstrated that resting state BOLD signals exhibit structure-specific correlations, suggesting that neural activities may be encoded in white matter BOLD signals as well, in this study we further confirm that functional stimulations can induce activities in relevant white matter pathways.
MRI data were acquired from twelve healthy and right-handed adults (mean age = 27.8 yrs, stdev = 4.8 yrs), using a 3T Philips Achieva scanner (Philips Healthcare, Inc., Best, Netherlands) and a 32-channel head coil. For each subject, the following set of MRI data were acquired: a) T2*-sensitive images using a multi-echo gradient echo, echo planar imaging (EPI) sequence with TR=3 s, TE=45 ms, matrix size=, FOV= mm2, 34 axial slices of 3 mm thick with zero gap, and 145 volumes. The images were acquired three times for each subject, respectively in resting state and with left and right palm stimulations. The sensory stimuli were prescribed in a block design format, starting with 30 seconds of palm stimulations by continuous brushing followed by 30 seconds of no stimulation, and so on. b) diffusion weighted images (DWI) obtained using a single-shot, spin echo EPI sequence with b=1000 s/mm2, 32 diffusion-sensitizing directions, TR=8.5 s, TE=65 ms, SENSE factor=3, matrix size=128×128, FOV=256×256, 68 axial slices of 2 mm thick with zero gap. Prior to imaging, each subject gave informed consent according to protocols approved by the Vanderbilt University Institutional Review Board.
All BOLD time series were corrected for slice timing and head motion, and subsequently smoothed with a Gaussian kernel at FWHM=4 mm using SPM12. The smoothed BOLD signals were then linearly detrended and normalized into unit variance voxel by voxel, and band-pass filtered to retain frequencies only of 0.01-0.08 Hz. Meanwhile, diffusion tensors were constructed from the DWI data using a least square approach4.
The primary somatosensory cortex (PSC) region, thalamus and base of pons in each hemisphere were defined in the MNI space initially. The PSC included Brodman’s areas (BA) 1, 2 and 3 in the postcentral gyrus, which was multiplied by an activation map generated on the basis of the magnitude of stimulus frequency. The activation adjusted PSC along with the thalamus and base of pons were then transferred to DWI space to guide fiber tracking. Probabilistic fiber tracking was applied for each hemisphere from thalamus to PSC and from thalamus to pons. Resulting streamlines were first automatically clustered into fiber bundles using an algorithm we developed earlier5 and then the one with the largest mean magnitude of stimulus frequency was chosen as the bundle skeleton.
Within the PSC region, the first principal component of all BOLD signals was derived, with which three maps of Pearson linear correlations were computed, respectively for resting state, left and right palm stimulations. These maps were subsequently co-registered with the b=0 DWI image for each subject and maximum correlation coefficient within a window of three voxels along the perpendicular direction of the bundle skeleton was projected onto it.
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