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Comparison of pCASL and FAIR for measuring Renal Blood Flow (RBF) of mouse kidney at 9.4T
Sankar Seramani1, Lydiane Hirschler2, Boominathan Ramasamy1, Sakthivel Sekar1, Kishore Bhakoo1, Emmanuel Luc Barbier2, and Kuan Jin Lee1

1Laboratory of Molecular Imaging, Singapore Bioimaging Consortium, Singapore, Singapore, 2Université Grenoble Alpes, Grenoble Institut des Neurosciences, Grenoble, France

Synopsis

Arterial Spin Labeling (ASL) is a non-invasive MRI technique which can be used to measure quantitative renal perfusion without the injection of contrast agents. The goal of this study is to compare the performance of pCASL with FAIR in measuring Renal Blood Flow in mouse kidney at Ultra High Field (UHF) MR. Based on our experimental results, pCASL based perfusion measurement shows similar reproducibility when compared to FAIR method. pCASL shows better SNR sensitivity and lower in ROI variation of RBF in the kidney when compared to FAIR based ASL method at 9.4 Tesla.

Introduction

Gadolinium based contrast agents are currently used in clinically to determine renal perfusion, but these contrast agents are contra-indicated for the patients with end stage renal disease. Arterial Spin Labeling (ASL) is a non-invasive MRI technique which can be used to measure quantitative renal perfusion without the injection of contrast agents. The goal of this study is to compare the performance of pCASL with FAIR in measuring Renal Blood Flow in mouse kidney at Ultra High Field (UHF) MR.

Materials and Methods:

MR Imaging experiments carried out in this study were approved and in compliance with IACUC (Institutional Animal Care and Use Committee). MR imaging was performed on 9.4T Bruker Biospec scanner/ Avance III Console/Paravision 6.01 using a 86 mm volume transmit and 4-channel phased array receive coil. Four male Balb/C mice were used in this study. The animals were initially anesthetized with 3% isoflurane and subsequently maintained at 2-3% isoflurane during the scan. Their respiration rates were closely maintained between 50-60 bpm (~1100ms) to match the labelling duration (3000ms) and the post labelling delay (300ms). The labeling ends at 3300ms after 3 respiration cycle (3 x 1100ms), so that the image acquisition starts at the quiescent expiration period of the respiratory cycle during the pCASL experiments as reported earlier by Duhamel et al [2].

MR Experiments:

pCASL sequence parameters were adapted from a previous report on rat brain [1]. Unbalanced labeling pCASL pulses were applied in the mouse aorta (at ~1cm away from the iso-center) for 3s followed by a 300ms post-labeling delay. The labeling pulse train consisted of Hanning window shaped RF pulses with B1 of 5μT, pulse duration/pulse rate of 400μs/800μs. Gmax/Gave = 45/5 mT/m, 3D Mapshim procedure was done on the entire abdominal area covering both the imaging and labelling slice before the imaging experiment. Both label and control phase optimization pre-scans were performed with a slice thickness= of 4mm, labeling duration τ= 1.5s, No of Repetition=1. The optimal labeling phase was computed and used to measure the actual pCASL perfusion measurement as reported earlier [1]. For the pCASL measurement, Labelling duration of τ=3s and Post Labelling Delay (PLD) of 300ms were used. Image acquisition was performed at the iso-center with single-shot EPI with FOV=3x3cm², slice thickness=1.5mm, matrix=128x128, TE=22ms, TR=4000ms, 30 repetitions. To quantify RBF, T1 maps were acquired with single shot EPI with slice selective inversion at 10 TI’s ranging from 30 to 8000 with a TR of 10000) and inversion efficiencies were measured with fcFLASH sequence at ~4 mm below the labeling slice with PLD=0 and Labeling duration of 200ms. A FAIR based PASL dataset was also measured with 11 TI’s ranging from 30 to 10000 and TR=12000. The FAIR-derived CBF and labeling efficiency were compared with fcFLASH based acquisition. Perfusion imaging experiments were also carried on a single mouse kidney on different days to determine the reproducibility of CBF derived using pCASL.

Results and Discussion:

In order to measure the reproducibility of the experiment, we used a single mouse imaged on different sessions over three days. Figure 1(a)-(i) shows the results of pCASL based perfusion imaging on a mouse imaged thrice to access the reproducibility. The perfusion determined is using either pCASL or FAIR was comparable, with a range of 90 and 85 ml/100g/min respectively. The reproducibility of an ASL experiment is highly dependent on several factors such as motion artefact, respiration rate, location of the labelling and imaging slices relative to iso-center etc. The quantitative results of these measurements and measurements on other mice are tabulated in Table 1. Figure 2 shows the comparison of pCASL vs FAIR measurement on a mouse after masking the background. Based on our results the RBF values measured with pCASL were 351±64, and 442±172 ml/100gm/min with FAIR. The inversion efficiency for pCASL measured with fcFLASH and FAIR were around 81% and 65% respectively, which is comparable to the range of inversion efficiency derived by FAIR around 61-65% reported by Duhamel et al [2] on the mouse kidney at 11.7 Tesla.

Conclusion:

In summary, pCASL based perfusion measurement shows similar reproducibility when compared to FAIR method. The difference in labeling efficiency estimated with fcFLASH and FAIR methods is around 17 % for all the experiments. pCASL shows better SNR sensitivity and lower in ROI variation of RBF in the kidney when compared to FAIR based ASL method. Future work will concentrate on improving reproducibility of kidney ASL by controlling the respiration rate at the optimal level, position of imaging and labeling slice to provide higher labeling efficiency, optimization of shim volumes etc.

Acknowledgements

No acknowledgement found.

References

[1] Hirschler et al, Proc of ISMRM 2015. [2]Duhamel et al, Magn Reson Med 2014.

Figures

Figure 1: Results of pCASL in mouse kidney on the same mouse repeated on a different imaging session

Figure 2: pCASL vs FAIR results on the same mouse

Table 1: Summary of RBF results from mouse kidney using pCASL and FAIR method

Proc. Intl. Soc. Mag. Reson. Med. 25 (2017)
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