Peter Koken1, Thomas Amthor1, Mariya Doneva1, Holger Eggers1, Karsten Sommer1, Jakob Meineke1, and Peter Börnert1,2
1Philips Research Europe, Hamburg, Germany, 2Dept. Radiology, LUMC, Leiden, Netherlands
Synopsis
Efficient,
highly under-sampled spiral acquisition is preferred in magnetic resonance
fingerprinting (MRF). However, although the spiral is very efficient in terms
of sampling, it is sensitive to all kinds of off-resonance effects resulting in
signal blurring. This effect leads to geometric distortion and matching errors, reducing accuracy significantly. To overcome these
limitations, the present work proposes to combine spiral-based MRF with field
map-based deblurring, e.g. by conjugate phase reconstruction (CPR). The basic
feasibility of this approach for under-sampled MRF is
shown in phantom and in-vivo experiments, underlining
the effectiveness of this simple correction approach paving the way for even
more efficient MRF sampling.
Introduction
MR Fingerprinting (MRF)1,2
has been introduced as a new technique for quantitative MRI. It can be used for
MR parameter encoding (T1, T2, etc.). A compromise between the parameter
encoding and the spatial encoding dimension is made to reduce the total
scanning time. Therefore, efficient spiral sampling was proposed in combination
with under-sampling1. After gridding the measured spiral k-space
data, dictionary matching is performed to identify tissue properties1.
However, although the spiral is very efficient in terms of sampling, it is
sensitive to all kinds of off-resonance effects resulting in signal blurring3.
This effect leads to geometric distortion as well as to degraded MRF parameter
estimation accuracy. To overcome these limitations, the present work proposes
to combine spiral-based MRF with appropriate field-map-based deblurring (e.g.
via 3,4). The basic feasibility of this approach with and without
under-sampling is shown in phantom and in-vivo experiments.
Methods
Using
a B0 field map and a conjugate phase reconstruction (CPR)4,
off-resonance effects in conventional spiral imaging can be removed during
reconstruction or as a post-processing step. However, in case of k-space
under-sampling, where the Nyquist criterion is not fulfilled, the application
of CPR is problematic. In an under-sampled spiral image, each voxel is
contaminated by fold-over from other spatial locations5, spoiling
the unique spatial relationship between voxel signal and off-resonance, meaning
that the deblurring result is by far not correct. However, rotating the spiral
under-sampling pattern in MRF from shot to shot results in the folding signal
part for each CPR-corrected voxel to change incoherently in time, whereas the
true voxel signal does not. Accordingly, applying a voxel-specific demodulation
works correctly for the true signal part. It does not change the properties of
the under-sampling aliasing, which is then suppressed by the MRF matching
process, making CPR for MRF work. This approach was implemented and tested in a
phantom (Diagnostic Sonar, Eurospin II) and in vivo (five healthy volunteers)
on a 3T MR system (Philips, Achieva) with an eight-channel head coil. The
spoiled gradient-echo MRF sequence2 had 250 RF shots: a flip angle
ramp from 0° to 60° over 120 steps, followed by a constant part with 60° over
130 steps. This sequence was preceded by spin inversion (inversion time 20ms).
TR was fixed to 30ms, TE was fixed to 3ms. A variable frequency spiral readout
(AQ-window: 20ms, 16 interleaves) was used to acquire a 2D slice (FOV/pixel
size: 230/1.0mm²) with 8mm slice thickness. The total scan time without
under-sampling was 2:16min. Different under-sampling factors R=2, 4, 8, 16 were
used. A corresponding B0 field map was obtained using a Cartesian
dual-acquisition gradient echo scan, matching the resolution of a fully sampled
spiral using TE/TR: 5/10ms employing a TE increment of 2.3ms (W/F in-phase)
with 2.6s total scanning time. Gridding reconstruction, complex coil
combination, and subsequent CPR were performed for each MRF encoding step
followed by dictionary-based voxel-wise signal evaluation2.
Results
Figure 1 shows selected results from
the phantom scans. All maps derived from the uncorrected reconstructions show
strong geometric distortions and incorrect matching at the position of the two
uppermost tubes. CPR reconstruction from the same measured data removes the distortions, independent of the
under-sampling factor. For the fully sampled scans, the distortions are also
visible in the underlying image data. Figure 2 shows T1 and T2 maps from one of
the volunteers (under-sampling factor R=8, scan time 17s). The uncorrected maps
show strong blurring at the position of the ventricle and geometric distortion
at the frontal lobe, which is not visible in the CPR reconstructions.
Discussion
Although CPR is theoretically not
applicable to under-sampled data, it works in combination with MRF and shows
significant improvements in image quality. It can allow for a more effective
spiral sampling in MRF by choosing a longer acquisition window. Here the field
map was obtained from a separate scan, but it is conceivable to estimate the
field map from the acquired MRF data themselves1. This can be done
by first using MRF to estimate B0 from the under-sampled, uncorrected data,
followed by an off-resonance compensated MRF reconstruction. For the time being
the use of CPR, although it is only a simple approximation, is a feasible approach
to improve geometric and parameter estimation accuracy in MRF. In the future,
off-resonance correction will have to be integrated in more sophisticated MRF
reconstruction approaches.
Acknowledgements
No acknowledgement found.References
[1] Ma D, et al. Magnetic
resonance fingerprinting. Nature, 2013;495:187-193
[2] Jiang Y, et al. MR Fingerprinting using Fast Imaging with Steady State
Precession (FISP) with spiral readout. Magn Reson Med 2015;74:1621-1632.
[3] Noll DC, et al. A homogeneity correction
method for magnetic resonance imaging with timevarying gradients. IEEE Trans
Med Imaging 1991;10:629–637.
[4] Eggers H, et al. Field
inhomogeneity correction based on gridding reconstruction for magnetic
resonance imaging. IEEE Trans Med Imaging 2007; 26:374–384.
[5] Pruessmann, K. P., et al. Advances
in sensitivity encoding with arbitrary k-space
trajectories. Magn. Reson. Med., 2001;46: 638–651.