Moritz Zaiss1, Philipp Ehses1, and Klaus Scheffler1
1Magnetic Resonance Center, Max-Planck-Institute for biological cybernetics, Tuebingen, Germany
Synopsis
In
this study, we present a single-shot 3D MRI readout that allows acquisition of
a CEST prepared volume within 2 s. This makes it possible to correct for motion,
which otherwise can cause severe artifacts in CEST imaging.
Purpose
Chemical
exchange saturation transfer (CEST) signals contain relevant information on the
molecular and microenvironmental level, but with magnitudes of only some % of
the water signal [1,2]. Further, CEST spectrum acquisition is relatively time
consuming as several label and reference scans and also an M0 (unsaturated
thermal magnetization) scan needs to be acquired to be able to calculate a
proper contrast. Thus several minutes can pass between two acquired images
which are then used to calculate a CEST contrast. This makes CEST prone to
motion artifacts that are easily in the order of 10% of the water signal. To
solve this issue, we propose snapCEST, a single-shot GRE readout with centric
spiral reordering that allows to acquire a 22x18x4 cm3 volume within
2.5s after CEST preparation. The single-shot acquisition enables retrospective motioncorrection
in post-processing without the need of navigators or other motion tracking
efforts. This may be an important development for robust CEST MRI in clinical
trials.Materials and Methods
snapCEST
imaging consists of a spectral but not spatial selective saturation period of
5s (a train of 150 Gaussian-shaped RF pulses, tpulse = 15 ms, tdelay = 15 ms, tsat
= 4.5 s, B1,mean = 1 µT) and a subsequent readout phase of 2.5 s
realized by a single-shot centric-spiral reordered 3D GRE readout (680 k-space
lines, FA=5°, TE=1.85ms , TR=3.64, Grappa=3, elliptical scanning, BW=700Hz/px, resolution
1.5x1.5x2 mm3, FOV=22x18x4 cm3).
In
vivo snapCEST imaging was performed on a 9.4 T whole body MRI tomograph
(Siemens) on a healthy volunteer with informed consent and approval by the
local ethics committee. A custom-built head coil [3] was used for signal
transmission/reception (16 transmit / 31 receive channels). SNR was calculated
using 20 pseudo replicas, Z-spectra and CEST MTRasym maps were
obtained after saturation at 95 offsets between -50 and 50 ppm with denser
sampling between -5 and 5 ppm. For tSNR calculation 42 repeated measurements
after saturation at -3.5 ppm were acquired; during the repeated measurements
the volunteer was asked to move the head thrice. Motion correction was
performed using the 3Dvolreg function of AFNI [4].Results and Disccussion
Fig
1 shows that snapCEST yields presaturated images of good quality (Fig1a) with
decent SNR (Fig1b). For the first 15 measurements, where the volunteer was
asked to lie still, the tSNR calculation shows lower values before registration
(Fig1c) than after registration (Fig1d). The sagittal view of the head in Figs
2a and d show that the nodding was quite strong but could be corrected by the
volume registration. Figure 2c reveals that already for the first 13
measurements small movements are apparent. Before measurement number 14, 19,
and 29 the volunteer was asked to nod (which would be the worst case for 2D
single slice methods). Fig 2b and e show the tSNR of the full 42 repeated
measurements; tSNR without registration in b) shows rather low magnitude,
especially outside the homogeneous WM region. Motion correction greatly
improves the tSNR (Fig2e). Figure 2c shows that the movements have sever
influences in the Z-spectrum value Z(-3.5ppm) of specific ROIs (more than 20%
signal change) which could be drastically lowered by snapCEST with motion
correction (Fig2f).
Figure
3 shows that in a volunteer that was asked to lie still, again small motion
appeared that lead to direct changes in the Z-spectrum (Fig3a) and the
asymmetry spectrum (Fig3b). Important to note: these motion artifacts are not
at all easy to identify in the Z-spectrum or the asymmetry spectrum and can be
misinterpreted as altered CEST effects. Whereas the contrast shows to be
relatively similar without (Fig 3c) and with motion correction (Fig 3d), the
difference map (Fig3e) reveals that there are signal changes of several percent.
As indicated by the white arrow that could lead to misinterpretation of e.g.
tumor areas in patient studies where even more motion is expected. We want to
note that the same approach was realized and tested at clinical field strengths
(3T) with similar results (data not shown). Using phase information of the GRE
possibly allows retrospective B0 correction as well.Conclusion
Motion
is a big problem for difference methods with long scanning time and small
signals such as CEST. Especially, such artifacts are hard to identify and can
lead to misinterpretation. We showed
that the fast 3D snapCEST approach with retrospective registration can solve
this issue: it is easily applicable and is able to correct motion artifacts in
CEST images. In addition, 3D acquisition with snapCEST yields an improved SNR
and extended coverage of the brain, thus makes it a useful tool for clinical
studies.Acknowledgements
No acknowledgement found.References
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