Michael Ohliger1, Cornelius von Morze1, Jermey Gordon1, Peder EZ Larson1, and Daniel Vigneron1
1Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, United States
Synopsis
Accurate RF coil localization is important for
hyperpolarized 13C MRI. Fiducial markers can be constructed from 55Mn and
localized using projection imaging. This study examines the minimum number of
projections necessary to localize the markers subject to the known distances
between markers. This would potentially allow marker localization to be
automated as part of prescan.
Introduction
Receiver coil sensitivity calibration is important for
hyperpolarized carbon 13 MRI, especially for parallel imaging. Low natural
abundance prevents external measurements prior to the study, and acquisition of
autocalibrating data cuts into possible acceleration by parallel imaging. Computed
sensitivities are potentially useful for sensitivity correction but require precise
knowledge of coil location. It has been proposed to apply direct detection of manganese-55
(55Mn) fiducial markers to precisely determine coil position (Ref 1).
In this approach, markers are placed in a triangular configuration close to
the coil conductor path. 55Mn resonates very close to 13C
such that 55Mn images can easily be obtained using 13C coils
(Ref 2). The markers can be rapidly localized through a short series of 1D
projections, in which markers appear as spectral peaks corresponding to spatial
locations along that axis (Figure 1). This approach could facilitate rapid,
automated detection of marker location, just prior to 13C scanning, potentially
reducing errors due to subject motion. The purpose of this study was to
determine the minimum number of projections required for the purpose of 13C
receiver coil sensitivity calibration.Methods
A prototype transmit-receive 13C RF coil was
designed (Figure 1), with 3 small hollow balls made of high density
polyethylene (Precision Plastic Ball Company) affixed and filled with
approximately 20 μl of 3M NaMnO4. Projection spectra along the x-axis and
y-axis were obtained using a 1D GRE sequence (TR 40ms, 64 averages), with acquisition
time 3 s/projection. Although the spatial location of the spectral peaks can be
measured from the frequency of the acquired data, it is not possible to know
which peak corresponds to which marker. There are, in general, 6 possible
permutations for each projection. However, the distance between markers can be measured exactly and used to constrain the
possible combinations.
In order to test this strategy and determine the number of
required projections, we performed simulations using Matlab. Vectors
corresponding to the marker positions in Figure 1 were constructed and subject
to rotations along three axes (Figure 2). A total of 24,624 possible rotations
were considered in order to simulate all possible positions of the coil. For
each rotation, the triangle vertices were projected along x-, y-, and z- axes. All
possible fiducial marker assignments were made that were consistent with the
projections. In general, there were 6 x 6 x 6 = 216 possible configurations for
each rotation tested. For each of these potential marker configurations, the
distance between markers was constructed and computed with the known values. The
optimal candidate was selected by minimizing the root mean square of the
computed and known marker distances (Figure 3). Ideally, there should be only
one candidate configuration, corresponding to the actual location of the
markers. In that case, marker localization (and therefore coil localization)
could be completely automated.
When more than one candidate configuration was obtained from
the algorithm described above, additional projections were incorporated by
simulating projections along two additional directions: 1/sqrt(3)[1,1,1] and
1/sqrt(3)[1,-1,1]. Candidate configurations were selected that correctly
predicted the projections along those axes.Results
The number of candidate configurations depended on the root mean squared threshold placed on the candidate distance between the markers compared to
known marker distances. For a threshold of 0.01 mm, 3 projections yielded
192/24,624 rotations with 4 candidates, 1,410 rotations with 2 candidates, and
23,022 (93%) with only one candidate (Figure 4a). If a 4th
projection was incorporated, then 24,608 (99.9%) of possible rotations have
only a single candidate configuration. When a 5th projection was
incorporated, all rotations had a single candidate configuration. Using a
larger or smaller cutoff changes the relative number of rotations that have a
single solution.Discussion
The minimum number projections needed to accurately
determine coil position was previously unknown. For example, when considering
projections onto the three cardinal axes, there are potential reflections that
give exactly the same projections and therefore cannot be distinguished. Additional
oblique projections could resolve this ambiguity, but each projection increases
scan time and so it is important to know the minimum number of projections
necessary to achieve accurate localization. Under ideal conditions, five projections completely localized a triangular set of fiducial markers, bringing
forward the possibility of automated detection of coil positioning, potentially
as part of a prescan. However, achieving this requires very high precision in
the measurement of the relative coil positions (0.01 mm), which may be
challenging in practice. Furthermore, we have not considered noise effects or the finite
resolution of the acquired spectra, which may also impact the number of
projections needed.Acknowledgements
Funding NIBIB P41EB013598References
1. Ohliger MA, et al "55Mn Fiducial Markers for Automated Coil Localization and Sensitivity Determination for Use With Hyperpolarized 13C MRI." ISMRM 2016 pg 3620
2. Morze von C, Carvajal L, Reed GD, Swisher CL, Tropp J, Vigneron DB. Magnetic Resonance Imaging. Magn Reson Imaging 2014;32:1165–1170. doi: 10.1016/j.mri.2014.08.030.