Spinocerebellar ataxias (SCAs) are neurodegenerative disorders characterized by predominant atrophy of the cerebellum and pons, with the main symptom being ataxia. There is currently no treatment for this disorder due to the lack of robust biomarkers to evaluate the disease progression. This study aimed to identify robust biomarkers for this disorder using a combination of magnetic resonance spectroscopy and imaging techniques. This study confirmed neurometabolic alterations in SCAs as well as microstructural modifications resulting from the disease. This study also showed that imaging biomarkers are more sensitive to disease progression than clinical scores.
We assessed longitudinal data at baseline and 24 months for clinical scores, SARA (scale for the assessment and rating of ataxia) and brain volumetry. The brain images were segmented manually by hand and automatically using Freesurfer.3 Segmentation of the pons was based on probabilistic atlas and Bayesian inference implemented in Freesurfer.4 Atrophy was calculated as the volume change relative to baseline and normalized by the time between visits.
Diffusion imaging was performed at 24 months to assess fiber integrity at b value of 1500 s/mm2 (slice thickness= 2 mm isotropic, 128 x 128 matrix, FOV= 256, 60 directions). The directions were interleaved with five b0 after every 12 directions and another b0 with opposite phase-encode blip were acquired for eddy current and distortion correction using FMRIB Software Library (http://fsl.fmrib.ox.ac.uk/fsl/). The data were fitted to generate diffusion metrics including fractional anisotropy (FA) and radial diffusivity (RD) maps. Tract-based spatial statistics (TBSS)5 were performed on the diffusion metrics including FA and RD and statistical tests were performed using fsl randomize.
We calculated the effect size for clinical scores, manual segmentation and Freesurfer segmentation as the mean change to the standard deviation of the change.6
We also performed proton magnetic resonance spectroscopy (1H MRS) using an optimized semi-LASER protocol7 (TR= 5000 ms, TE= 28 ms, 64 averages) at 3T in the cerebellar vermis (25 x 16 x 25 mm3) and pons (16 x 16 x 16 mm3) of SCA patients (SCA1, n= 14; SCA2, n= 12; SCA3, n= 19; SCA7, n= 10) and healthy controls (n= 24). Two unsuppressed water spectra were acquired for eddy current correction and as reference for metabolite quantification. Metabolites were quantified with LCModel as explained.8
Patients showed a significant increase in SARA scores (p<0.05) which reflects a decrease in motor function (Figure 1).
TBSS revealed decreased FA in the corticospinal tract, cerebellum and brainstem in SCAs 1 and 2 (p<0.05). Decreased FA was also observed in the inferior and superior longitudinal fasciculus and the corpus callosum in SCA2 (p<0.05). In SCA3, decreased FA was localized to the brainstem, cerebellum and the cerebral peduncle. There was however no change in FA in SCA7 possibly due to the early disease stage of SCA7 patients (Figure 2a). Increased RD, which reflects changes in axonal diameters, density or demyelination, was observed in the cerebellum, brainstem and cerebral peduncles in all SCAs (p<0.05). There was also an increased RD in the corona radiata in SCA1, and the corticospinal tract, longitudinal fasciculus and corpus callosum in SCA2 (p<0.05) (Figure 2b). These changes in FA and RD reflect alterations of the white matter microstructure due to the disease.
Freesurfer segmentation of the pons and cerebellum showed that there was a significant decrease in brain volume over time with the rate of decrease significantly faster in SCAs than controls (Figure 3a). We also showed that FA correlated strongly with atrophy in the cerebellum and brainstem of SCA1 patients (Figure 3b).
Effect sizes calculated from the data collected showed that automatic segmentation of brain volumes is far superior to manual segmentation. This is because the poor contrast between subcortical structures makes it difficult to reliably segment structures such as the pons manually, and inter- and intra-rater variability introduces bias to the results (Figure 4).
We also observed neurochemical alterations in SCAs with decreased neuronal markers, N-acetylaspartate and glutamate, which reflect neuronal loss. The glial marker, myo-Inositol, and energetic maker, total creatine, were elevated in patients which may signify glial or energy compensation in response to the atrophy (Figure 5).
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