Dong-Hoon Lee1,2, Do-Wan Lee3,4,5, Yong Hyun Chung2, and Bong-Soo Han2
1Brain and Mind Centre, University of Sydney, Sydney, Australia, 2Department of Radiological Science, Yonsei University, Wonju, Korea, Republic of, 3Ewha Brain Institute, Ewha Womans University, Seoul, Korea, Republic of, 4Department of Biomedical Engineering, The Catholic University of Korea College of Medicine, Seoul, Korea, Republic of, 5Research Institute of Biomedical Engineering, The Catholic University of Korea, Seoul, Korea, Republic of
Synopsis
Deformable registration
process for in vivo human spine MR images can provide the crucial information
to investigate the diagnostic performance and treatment effects of pathologies.
Here, based on the scale invariant feature transform (SIFT) algorithm, we
attempted to evaluate the deformable registration process for spine images, and
compared with commercially mounted algorithm in MRI system. The results qualitatively
and quantitatively showed fine results, and clearly showed the reproducibility
of the use of SIFT algorithm compared with commercially mounted stitching
algorithm on MRI system. Our approach can be helpful for the extension of other
medical imaging modalities for image deformable registration.
Introduction
Diagnostic evaluation of in vivo human spine
structures (cervical, thoracic, and lumbar; called as C-T-L) is important for
assessing pathologies using crucial imaging tool, particularly MRI. However, it
is difficult to acquire the whole C-T-L spine image at once due to the limited
field-of-view (FOV) of receiver coil system.1-3 Thus, deformable image
registration method that made a single image through the separate images was
widely used to perform the combining images, effectively.3,4 In this study, we
applied Scale Invariant Features Transform (SIFT) algorithm to C-T-L spine MR
image for deformable registration of them to investigate the feasibility and
reproducibility.Method
MRI data acquisition: Five
male healthy subjects (mean age ± standard deviation: 26 ± 2.1 years)
participated in this study. Each part of C-T-L spine images were acquired with
Philips 3.0 T MRI system (Achieva 3.0 T; Philips Medical Systems, The Best, Netherlands)
using FSE sequence (image parameters: TE/TR=120/3,000 ms, FOV=288 mm2, ETL=27,
matrix size=576 × 576, slice thickness=4.4 mm, and number of slices=5).
Data processing: The SIFT algorithm was used to detect the feature
points created from an edge or corner of an object
for vector calculation. The SIFT algorithm was applied in five steps; detection
of the extrema in scale-space, keypoint localization, keypoint orientation
assignment, Generation of keypoint descriptor and Point matching process.5 In
the case of multi-slice images, the point selection is only performed at the
most central slice among them, and other slices are combined with the selected
point at the most central slice to register images.
For quantitative comparisons between the registered
images using SIFT algorithm and commercially mounted algorithm in MRI system,
we performed Bland-Altman analysis,6 and calculated Normalized Mean Square
Error (NMSE) and Pearson’s correlation coefficients. These quantitative
analysis procedures performed with images from MRI system. Note that there is no
gold standard or ground truth for stitching image results, we assumed that the registered
images from commercial MRI system as a reference images for quantitative
analysis in this study.Results and Discussion
Fig.1 shows
the comparative results, which are sagittal and coronal section images from representative
subject, between the use of registered results with SIFT algorithm (A and C)
and the use of deformable registration algorithm within the commercial MRI
system (B and D). The calculated NMSE values from all subjects are represented
1.74×10−4 ± 3.68×10−5 (sagittal) and 1.85×10−4 ± 2.92×10−5 (coronal). For
statistical results performed with paired t-test between the use of the SIFT
algorithm and commercially mounted algorithm, note that there is no significant
differences in sagittal or coronal image sections. (all p > 0.05).
Fig.2 shows
the quantitative comparison of the mean signal intensities from whole registered
images with SIFT and commercially mounted algorithms in each subject’s image slices
(A and B), and Bland-Altman analysis results (C and D). Notably, the calculated
Pearson's coefficient values (r) represent high correlations between two
stitched results performed with SIFT algorithm and commercially mounted
algorithm (r = 0.88; p < 0.001 for sagittal section; r = 0.86; p < 0.001
for coronal section). In addition, the signal intensities comparison results,
which are located close to the y = x line, and high coefficients of determination
values (R2 = 0.95 for sagittal section; R2 = 0.93 for coronal section) also
clearly indicate that the feasibility and reliability for the use of SIFT
algorithm to spine MR image deformable registration process. For the
Bland-Altman analysis results, the mean differences and standard deviations are
-104.48 ± 280.88 A.U., and -187.79 ± 315.78 A.U. for sagittal and coronal
section results, respectively. The all differences between SIFT algorithm and
commercially mounted algorithm are within the ranges of ±1.96 times the
standard deviations of the means, and there are no significant biases at the sagittal
and coronal section results.Conclusions
We provided preliminary
findings of the feasibility and the validity of the SIFT algorithm application
to deformable registration for in vivo human spine images. As shown in the
results, the algorithm could be performed well in the MR spine images. We
believe that our approach could be extended to the other image deformable
registration fields such as whole-body MRIs and other imaging modalities as
well, and could be helpful for clinical applications and diagnosis
improvements.Acknowledgements
No acknowledgement found.References
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