Paul Kinchesh1, Boris Vojnovic1, Stuart Gilchrist1, Robert Newman1, and Sean Smart1
1Oxford Institute for Radiation Oncology, University of Oxford, Oxford, United Kingdom
Synopsis
Prospective cardio-respiratory self-gating is
demonstrated in the mouse. A gradient echo scan operating at constant TR
enabled acquisition of CINE data blocks or maintenance of the NMR steady state depending
on the level of a gating control signal that was evaluated within each TR. A
portion of the FID during each TR was submitted to a signal processor chain for
streaming into a pseudo-continuous analogue cardio-respiratory signal trace and
conversion to a series of logic control signals for gating.
Introduction
Retrospective gating, using the NMR signal itself to
drive the reconstruction data selection, is widely used as a means of reducing
the cardio-respiratory (CR) motions without the need for external signal
detection.1-4
However, retrospective gating scans are long due to
the need to acquire multiple repeats of an imaging volume for post hoc data
sorting. Prospective self-gating has been used to improve the scan efficiency
in clinical MRI as a means of improving efficiency.5 Here, we
describe a simple apparatus that enables the use of the NMR signal itself to
drive prospective CR self-gated imaging in the mouse using standard commercial
gating controllers on a standard commercial preclinical MRI system.
Methods.
MRI was performed at 4.7 T (Varian VNMRS) with the NMR
signal mixed from the Larmor frequency to a 20 MHz carrier frequency for
transmission to the receiver chain. This 20 MHz signal was routed, under pulse
sequence control, to a gating device or the scanner digitizer within each TR.
The gating device consists of a demodulation stage to remove the 20 MHz carrier
frequency leaving the audio-frequency NMR signal in vector power mode. This
signal was low-pass filtered (3.5 Hz, -3dBm) to reduce broadband noise and streamed
to give a pseudo-continuous analogue CR signal to a standard physiological
gating controller (Biopac MP150, DA100C amplifier and DTU200 gating unit). The
DA100C amplifier included a 10 Hz low pass filter to generate the NMR derived
signal trace labelled ‘NMR’ in Figure 1. The threshold level LR is combined
with a user variable delay τ to generate the respiratory R-logic signal gate.
The R-logic gate is used for selection of CR logic signals generated by the threshold
level LCR such that only those heartbeats not coincident with the
breaths were used for imaging.
A steady-state maintained 2D gradient echo CINE scan (TE
3 ms, TR 5.3 ms, FA 10°, FOV 32x32 mm2,
matrix 128x128, THK 1.5 mm, CINE loop NE 23) was operated with gating control and
reacquisitions as described previously6 and shown in Figure 2.
Two mice were anaesthetized (isoflurane 1-2% in 30%
oxygen in air) twice each for imaging. Subcutaneously-implanted ECG needles and a
pressure balloon were used to assess the conventional prospectively ECG-gated
scan mode and to monitor the animal whilst MRI was not being performed. The ECG
and pressure balloon signals were then removed from the gating controller and
replaced with the NMR signal.
Results
CINE images produced using conventional prospective ECG-driven
gating and with the prospective self-gating are shown in Figures 3 and 4,
respectively. A clear delay in the onset of imaging was observed for the self-gated scan
consequent to the choice of prototype audiofilter used to suppress noise on the
NMR-derived physiological signal trace. Figure 5 shows that when
images from end diastole onwards are aligned for each scan mode the images are
near equivalent, though there is some additional blurring in the self-gated
images. The prospectively self-gated CINE images took approximately 30 s to
acquire. The traces for the ECG, respiration and NMR signals of Figure 1 are
taken from one scan for one mouse and were observed to be representative for
all scans.
Discussion
CINE imaging in the mouse, driven through prospective
self-gating was straightforward to implement without any significant
modification of the basic scanner hardware beyond that required for
conventional prospective gating. The additional signal processing hardware
acted as a bridging point between the NMR receiver line and the commercial
gating control unit. Whilst the filtering used to suppress the noise on the NMR
signal used to control gating was harsh, with a rather significant delay to the
onset of imaging, this can be improved upon through use of a better-designed
filter. The blurring seen in the self-gated scan is, we believe, a result of
the increasing baseline signal seen in between breaths causing a jittered alignment
of phase encode steps with the cardiac cycle. Again, this can be improved upon
with a better signal filtering or conditioning scheme, such as gating via the
derivative of the cardiac signal.
The time saving enabled by using prospective
self-gating compared to retrospective self gating is quite limited in the case
of CINE imaging described, but would be much higher in the case of k-space
segmented acquisitions in which multiple lines of k-space can be acquired in an
ordered manner after detection of each selected cardiac event.
Conclusion
Prospective self-gated imaging is straightforward to
implement, even for mice, and offers the potential to reduce the scan times
required for retrospectively self gated imaging.Acknowledgements
The work presented was supported
financially by Cancer Research UK (CRUK grants C5255/A12678, C2522/A10339), the
Engineering and Physical Sciences Research Council (EPSRC grant C2522/A10339)
and the Medical Research Council Unit Grant for the Oxford Institute for
Radiation Oncology.References
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