Paul John Clifford Hughes1, Bilal Tahir1,2, Felix C. Horn1, Alberto Biancardi1, Rob Ireland2, Helen Marshall1, and Jim Wild1,3
1POLARIS, Academic Unit of Radiology, University of Sheffield, Sheffield, United Kingdom, 2Academic Unit of Clinical Oncology, University of Sheffield, Sheffield, United Kingdom, 3Insigneo Institute for in silico Medicine, Sheffield, United Kingdom
Synopsis
Analysis of the matching of
ventilation and perfusion using MRI is an important area of research in the
pulmonary MRI community. This work presents a quantitative method of voxelwise
analysis of ventilation from hyperpolarized gas MRI and perfusion from dynamic
contrast enhanced 1H MRI. The method developed allows for direct
comparison of ventilation and perfusion including global measurements of
ventilated and perfused volume.
Background
Ventilation and perfusion (V-Q) imaging is an
important tool to analyse various lung diseases. Most commonly V-Q imaging is
done using single photon emission computed tomography (SPECT)1,2. SPECT
uses ionising radiation and has lower spatial resolution than MRI. MRI is more
readily available therefore a method using hyperpolarized (HP) gas 1H
contrast enhanced (CE) imaging to quantify the matching of V and Q is a key
area of research within the pulmonary MRI community. Using these methods it may
be possible to identify areas of shunt and wasted ventilation, which do not
contribute to gas exchange3. To analyse ventilation in a
quantitative manner the fractional ventilation (FV) method developed by Tzeng
et al4 was used along with the quantitative measure of pulmonary
blood volume5 (PBV).Purpose
To develop software for
quantitative assessment of ventilation (V) and perfusion (Q) matching in four
healthy volunteers and two asthmatic patients with images acquired using HP gas and CE 1H MRI.Methods
4 healthy volunteers and 2 asthma
patients were imaged with same-breath hyperpolarized Helium-3 (3He) MRI and proton (1H) MRI at 1.5T6,7 (GE HDx, Milwaukee, WI). Same-breath 3He and 1H images were acquired at functional residual capacity
plus 1 liter (FRC+1).
3He / 1H anatomical
imaging: Volunteers were imaged with a 3He
transmit- receive vest coil (CMRS) after inhalation of a mix of hyperpolarized 3He
(polarized to 25%, 200ml) and N2 (800ml). Breath-hold
ventilation-weighted images were acquired using a 3D bSSFP sequence with full
lung coverage and reconstructed voxel size 1.5x1.5x5mm. 1H
anatomical images were acquired during the same breath-hold with the body coil6,7
using a 3D SPGR sequence with full lung coverage and the same resolution. In
the case of the patients 2D sequences were used8.
1H T1 imaging: Images
were acquired at three different flip angles using a 3D SPGR sequence with full
lung coverage and reconstructed voxel size 1.8x1.8x4mm immediately before the CE 1H perfusion scan9 for both healthy volunteers and patients.
1H CE perfusion imaging: During scanning volunteers/patients were re-positioned in a 1H 8-element
chest receiver coil. CE perfusion-weighted images were acquired using a 3D SPGR
sequence with full lung coverage, voxel size 1.8x1.8x5mm and 36 time-frames of ~0.5s each following injection of 0.05ml/kg gadolinium contrast agent (Gadovist)
at 2.5-4.5ml/s (scaled with weight) with 20ml saline flush.
Data
processing: Equilibrium relaxation (T10) and density (M0)
images were calculated using the Levenberg-Marquardt fitting algorithm10.
Fractional ventilation (FV) images were created from the 3He MRI as
described by Tzeng et al7. CE 1H perfusion images were quantitatively
analyzed using a gamma-variate fit model to calculate pulmonary blood volume10.
Images were analyzed following the proposed registration and segmentation workflow in figure 1. Images were
segmented as previously described using a Fuzzy-Logic algortithm11.
Perfusion image masks were created by manual delineation of the lung and
removal of vessels. Following this a threshold was applied to remove areas of
low perfusion (within 2 standard deviations of noise from the peak signal
enhancement image). Percent ventilated volume (%VV), percent perfused volume
(%PV) and the Dice similarity coefficient (DSC) of the ventilation and
perfusion image masks to assess areas of where either V or Q are non-zero (V/Q
matched) were calculated. All images were registered to the same spatial domain
as the same-breath 3He images using ANTs12.
Results and Discussion
A summary with the results for all the analyzed cases is presented in Table 1. A method
has been developed allowing voxel-by-voxel comparison of quantitative measures
of ventilation and perfusion. Registration overcomes the issue of images being
acquired with the patient in a different position and coil. This workflow also
allows for the quantitative assessment of perfused and ventilated areas of the
lung by calculation of the coefficient of variation (defined
as the standard deviation divided by the mean signal). Additionally, histograms
of PBV and FV may be compared to assess and probe the V-Q matching (Figure 2).
Finally measures of shunt and wasted ventilation may be calculated using the
image masks created in this work. An improvement was also seen in both
asthmatic patients in the DSC of the ventilation and perfusion following
bronchodilator administration.Conclusions
A method
for quantification of ventilation and perfusion, and voxelwise comparison was
developed and demonstrated in four healthy volunteers. This semi-automated image
processing workflow produces spatially registered maps of fractional
ventilation and pulmonary blood volume from which maps of the V/Q ratio may be
calculated. This methodology may be used for longitudinal monitoring of
patients at multiple timepoints or to assess the effect of intervention in a
single session.Acknowledgements
Airprom-FP7, NIHR,
MRC, Novartis and GlaxoSmithKline for fundingReferences
[1]
Roach et al. J NUCL MED, 2013, 54(9):1588-96.
doi:10.2967/jnumed.113.124602.; [2]
Hofman et al. INT J MOL IMAGING. 2011; 2011: 682949. doi: 10.1155/2011/682949; [3] West.
Respiratory physiology the essentials (8th edition), 2012; [4] Tzeng et al. J APPL PHYSIOL, 2009, 106(3), 813-822; [5] Ohno et al. AM J ROENTGENOL,
188(1), 48-56, 2007; [6] Horn
et al NMR BIOMED, DOI:10.1002/nbm.3187; [7]
Wild et al, RADIOLOGY,
267(1):251-5 (2013); [8] Hughes et al PROC
INTL SOC MAG RESON MED 23(2015), Abstract number 1504; [9] Naish et al MAGN RESON MED, 2009, 61(6):1507-14.
doi: 10.1002/mrm.21814.; [10] Li et
al. J MAGN RESON IMAGING, 2000, 2(2),
347-357; [11] Hughes et al PROC
INTL SOC MAG RESON MED 24(2016), Abstract number 1622; [12] Avants
et al. Advanced normalization tools (ANTS), INSIGHT
J, 2009;