2D Magnetic Resonance Elastography (MRE) is a validated method for staging liver fibrosis via liver stiffness measurements produced by introducing and imaging acoustic waves. Newer 3D MRE additionally images waves propagating out-of-plane. This retrospective study compared 2D and 3D liver MRE stiffness measurements across 600 patient exams. The two methods had excellent agreement, with 3D MRE yielding 6% lower stiffness and having lower failure rate. 3D MRE, which has the same acquisition time, is a good alternative for liver imaging as it does not suffer from out-of-plane propagation bias and has the added potential to characterize smaller abdominal organs.
3D MRE was performed in addition to the standard clinical 2D MRE protocol at our institution starting in 2013 to obtain validation data. Over 3000 exams containing both sets of data have been acquired since, and 600 of them were analyzed for this study. 2D MRE uses a GRE sequence to acquire, typically, four 10-mm slices during four 16-second breath holds. The 3D EPI-based sequence acquires 32 slices during three 21-second breath holds. As the 3D stiffness inversion uses 3D filters and processing kernels, the top and bottom 6 slices were discarded from the image analysis due to possible partial volume effects, leaving 20 valid slices.
All exams were processed using the automated elasticity calculation method7 to generate ROIs and calculate average liver stiffness. Exams were then reviewed by an experienced MRE reader to exclude technical failures which prevented the creation of an artifact-free ROI of at least 2000 voxels in the liver, and to adjust failed automated ROIs in otherwise useable exams. Stiffnesses and failure rates between 2D and 3D MRE were compared. Additionally, stiffnesses calculated from 20 3D MRE slices were compared to a quicker analysis which used 4 intermediate slices. The two processing methods were tested for equivalence using a margin of 5% (smallest practically important difference).
1) 2D and 3D MRE images from a representative exam are shown in Figure 1.
2) The stiffnesses yielded by 2D and 20-slice analysis of 3D MRE had excellent intra-class correlation of 0.968 (Figure 2) and were different by 6.05±13.50% (mean±std dev), with 3D MRE yielding lower mean stiffness (Figure 3).
3) Technical failure occurred
in 8.3% of 2D MRE and 6.3% of 3D MRE exams. Failure due to iron overload and
magnetic susceptibility (air in bowels or implants) was lower for 3D MRE (Table 1).
4) Automated ROIs needed modification in 7 (1.5%) of 2D MRE and in 10 (2.67%) 3D MRE exams, mainly in patients with tumors or ascites.
5) The difference between stiffnesses calculated from 20-slices of 3D MRE and from 4-slices of 3D MRE was 0.32% ± 1.99%. The results were statistically equivalent (p<0.001) at the 5% margin (Figure 4).
The findings from this data confirm a relatively small bias between 3D and 2D liver MRE results, with 3D MRE yielding lower stiffness values, and a lower failure rate for 3D MRE which has been observed in previous smaller studies.8-10 The EPI-based acquisition of 3D MRE is less T2*-sensitive than the standard GRE-based 2D acquisition, allowing it to work in a larger fraction of patients with iron overload, a condition which co-occurs with fibrosis. Spin-echo-based sequences able to deal with iron overload but having lower motion-sensitivity are also available in 2D.11 The 3D MRE images have lower image quality than GRE MRE (e.g., inter-tissue contrast, edge contrast, intensity homogeneity) but are adequate for automated processing.
1) Analyze additional data from the available 3000 exams with 2D and 3D MRE.
2) Review individual cases with large differences in stiffness and determine whether these are caused by processing differences or out-of-plane bias which should be present only in 2D MRE.
3) Compare 3D MRE stiffness with biopsy in approximately 400 patients where the latter is available, and calculate optimal 3D MRE cutoffs.
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