Suchandrima Banerjee1, Ken-Pin Hwang2,3, Peng Lai1, Marcel Warntjes4, and Ajit Shankaranarayanan1
1Global MR Applications & Workflow, GE Healthcare, Menlo Park, CA, United States, 2Global MR Applications & Workflow, GE Healthcare, Houston, TX, United States, 3Department of Imaging Physics, University of Texas M.D. Anderson Cancer Center, Houston, TX, United States, 4Synthetic MR Technologies AB, Stockholm, Sweden
Synopsis
Recently, several techniques for rapid simultaneous
mapping of proton density and T1, T2 relaxation parameters from a single acquisition
and generation of synthetic images of any desired image contrast have been
demonstrated, mostly in the brain. Such an approach could potentially shorten a
spine MRI exam which typically consists of multiple 2D acquisitions with
different contrast weightings. But even routine spine MRI is fraught with technical
challenges such as motion and inhomogeneity. So in this work we explore the
feasibility of obtaining synthetic MRI images of usable image quality in the
spine using a 2D quantitative mapping technique.Target Audience:
MR physicists and clinicians interested in spine
imaging
Purpose:
Spine
MRI exams, be it for looking at cord
pathologies, infection or investigating lower back pain, typically consist of
multiple 2D acquisitions with different contrast weightings [1]. Techniques
that extract proton density (PD) and T1, T2 relaxation maps simultaneously from
a single acquisition and use the multi-parametric maps to generate synthetic
images of any desired image contrast have been demonstrated in recent years,
mostly in the brain [2-7]. Such an approach could potentially shorten spine MRI
exams if for e.x. T1, T2 and PD images could be synthetically generated and
additionally quantitative T2 maps could be obtained from a single scan in a lower
back exam. But even routine day-to-day spine MRI is fraught with technical
challenges-motion from swallowing (cervical spine), cerebrospinal fluid (CSF)
flow, respiration, B0 inhomogeneity, B1 non-uniformity all pose impediments to
consistent image quality [8]. So we investigated if it would be feasible to
derive synthetic images using a 2D quantitative mapping technique, MAGiC, in
the 2 most often scanned spine regions-lumbar and the cervical spine.
Method:
In MAGiC, a
saturation delay multi echo fast spin echo (FSE) sequence is used to acquire multiple
saturation delay times and multiple spin echo times [9]. T1 and T2 fitting to
the different delay and echo times, computation of PD from the scaling of the
curves and further processing is performed by the SyMRI processing pipeline (SyntheticMR,
Linköping, Sweden).
1
volunteer each was scanned at the Lspine and Cspine with informed consent in
accordance with IRB guidelines of the site on a 3T scanner (GE MR 750 Waukesha,
WI) using six and nine elements of a spine array for the lumbar and cervical regions respectively. Data from four saturation delay times and 2 echo-times was collected with the above mentioned FSE sequence (FOV= 26 cm (Cspine: 18 cm),
phase FOV factor=0.8, slice thickness/gap=4/1 mm (Cspine: 3/1 mm), 20 slices,
TR/TE1/TE2 = 4000/21.5/85.5 ms, echo train length=12, matrix: 320x256, 20 slices,
scan time=9:30 mins) with phase encoding along the superior/inferior (S/I) direction, spatial saturation bands placed superiorly and inferiorly to the phase FOV and with full sampling to retrospectively explore optimal undersampling strategy,
Two reconstruction approaches were explored on the fully sampled data: 1) k-t adaptive ARC
(kat-ARC) [10] with simulated staggered time shifted sampling pattern across the temporal phases, and 2) ESPIRit, an iterative autocalibrated parallel imaging method that uses eigenvector maps [11] with simulated random undersampling pattern. Additionally, a local
low-rank (LLR) constraint was added to exploit data redundancy along the parameter
dimension [12]. Reconstructed images were
post-processed by the SyMRI pipeline.
Results:
The spine array used in this work offered limited
acceleration capabilities only in the S/I direction. Addition of local low rank
constraint to ESPIRiT provided appreciable improvement in SNR and image
quality, even for the small size of the parameter dimension. An example in the
Lspine from the first saturation delay timepoint is shown in Figure 1. kat-ARC and ESPIRiT-LLR reconstructions provided
comparable image quality at two-fold acceleration, while it was possible to
achieve slightly higher acceleration of up to 3 folds with the second approach albeit with
some SNR penalty. T1 FLAIR, T2 weighted images and R2 maps of the of the Lspine
processed from images reconstructed by ESPIRiT-LLR and T1, T2 weighted images and
R1 map of the Cspine processed from images reconstructed by kat-ARC, from simulated
2X acquisitions of 4 minutes and 45 seconds, which is slightly shorter than the
time typically taken to acquire 2 separate T1w and T2w sequences, are shown in
Figures 2 and 3 respectively. The Cspine images were noisier because of being
acquired at a higher resolution than the Lspine and had some flow ghosting.
Discussion
In this work we
showed the feasibility of deriving synthetic MR images in the spine based on a
2D quantitative mapping technique, with some challenges in the Cspine
where more robust motion compensation is needed. Additional derived contrast weightings such as phase sensitive inversion recovery (PSIR) or double inversion recovery (DIR) could potentially add value by helping visualize cord pathologies. While a 3D quantitative parameter mapping method would allow for multi-planar reformats, 2D acquisition might be more
suited to the spine due to motion considerations. Acceleration and exploitation of data
redundancy in the parameter dimension, and coil arrays with
better parallel imaging capabilities are crucial to achieving
SNR-efficiency in such parameter mapping techniques.
Acknowledgements
No acknowledgement found.References
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