Synopsis
We have recently developed an
optimized T1 mapping protocol for carotid atherosclerotic plaque imaging, using
a combination of inversion and recovery prepared acquisitions. This protocol requires
less images to be taken (and thus shorter acquisition time) for precise T1 estimation
than conventional inversion-prepared or saturation-prepared acquisition
schemes. However, estimating T1 from magnitude data, acquired with the
optimized settings, causes bimodality of T1 estimates, due to the ambiguity in
sign of the inversion prepared magnitude images. Simulations and experiments on
a hardware phantom and a volunteer show that the ambiguity resolves when we fit
a complex-valued model to the complex data.Purpose
Rupture of carotid
atherosclerotic plaque is a major cause of stroke. Plaque composition, is believed to be an important indicator for
rupture risk. For quantitative assessment of plaque composition, T
1 and T
2 relaxation
times can be used
1. In general, T
1 can be accurately and efficiently
quantified by a combined set of inversion and/or saturation prepared fast spin
echo (FSE) acquisitions
2. Our aim is to apply such a technique for T
1
mapping in the carotid artery wall. Conventionally, the T
1 is estimated by
fitting a signal model to the acquired magnitude images. However, the removal
of the sign information by only considering the magnitude data of inversion
prepared images, can lead to ambiguous T
1 values when the number of images is
low (see Figure 1). In this study, we investigate if ambiguity in T
1 estimation can
be eliminated by fitting complex-valued
data.
Methods
We focus on T1 mapping based
on a set of inversion and saturation
prepared acquisitions. The magnitude signal model is as follows:
Model 1: $$S=|A(1-Be^{-TIR_{1}}+(B-1)e^{-R_{1}TR})|$$
where B is the inversion
efficiency, TI the inversion time, TR the repetition time, R1 the relaxation
rate and A the unprepared magnitude. The complex signal model is given by:
Model 2: $$S=r_{a}e^{i\phi_{a}}(1-Be^{-TIR_{1}}+(B-1)e^{-R_{1}TR})$$
with ra the unprepared
magnitude, and $$$\phi_a$$$ the phase of the signal.
For
readout, we use a stabilized 3D FSE acquisition3, which leads to black blood
imaging suitable for carotid wall analysis. The preparation in each acquisition
consists of the saturation by the preceding readout, possibly followed by an
inversion pulse. Parameters TI and TR were optimized numerically, so as to
maximize the time efficiency of the entire protocol, resulting in: TI/TR = {91/973, 429/3725, -/1074, -/907}ms.
From this set of four inversion/saturation prepared images we estimate T1 by
either a) fitting Model 1 to the magnitude data, or b) fitting Model 2 to the
complex-valued data. Fitting was done with a maximum likelihood estimation
approach4.
In a Monte Carlo simulation, data
was generated using the complex signal model and the optimized parameters, for
a range of T1 values (100 through 1500ms) occurring in carotid plaque, B=1.9,
ra=1000, $$$\phi_{a}$$$=0, and Gaussian noise, $$$\mu$$$=0 and $$$\sigma$$$=33, was added to
the real and imaginary parts for each of 10.000 independent realizations.
In a hardware phantom experiment,
12 tubes were filled with water and different concentrations of gadolinium
trichloride to reduce T1 and agarose to reduce T21. For our imaging protocol
we used an echo-train-length of 18, echo spacing of 6ms and an acquired
voxel-size of 0.625x0.71x2mm$$$^{3}$$$.
In an in vivo example, a healthy volunteer is scanned with the
aforementioned protocol and parameters.
Results
Figure 2 shows the distribution
of estimated T1 for the Monte Carlo experiment (true T1=846ms).
A bimodal distribution can be
observed for the T1 estimates when Model 1 is used. After setting a manual
threshold to sort the estimates to one of the modes, we fit a normal
distribution to each mode with a built-in function of Matlab (normfit). Using
Model 1, the modes are T1=854±47.6ms and 539±32.6ms. Using Model 2 results in a single mode: T1=846.5±47.7ms. For the entire range of T1 (See Figure 3a), a bimodal
distribution is observed. Bimodality was assumed if the means of the assumed
modes were more than two $$$\sigma$$$ apart. When Model 2 is used, the ambiguity
issue is resolved (Figure 3b) and the correct T1 is recovered for all simulated
T1.
In the hardware phantom
experiment, several tubes show a non-uniform, bimodal T1 map (Figure 4a) when
Model 1 is used. In the example tube, Figure 4b, two modes can observed: T1=846.6±10.9ms
and 541.5±8.7ms. Using Model 2 results in uniform T1 maps in all tubes. The
example tube (Figure 4d) shows a single mode: T1=846.1±12.3ms, which corresponds to
the T1 found in the Monte Carlo experiment (Figure 2).
The in vivo example (Figure 5) shows that using Model 1 yields estimates T1=510.61±289.41ms in the carotid wall. With Model 2, T1 values of 939.12±206.75ms are found, which
are in accordance with those found in
previous studies (700-900ms)1.
Discussion and conclusion
Ambiguity in T
1
values estimated from magnitude data acquired with optimized TI/TR settings was
resolved by using complex data. This benefit of using complex data for T
1
estimation has previously not been explicitly identified
5. Our complex model
enables us to use the optimized TI/TR settings, which require less scan time than
conventional inversion recovery protocols that require more images for robust
estimation. Hence, we conclude that T
1
mapping with optimized TI/TR settings is more robust when complex data is used
for the fitting.
Acknowledgements
No acknowledgement found.References
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