Tianyi Qian1, Peipeng Liang2, and Kuncheng Li2
1MR Collaborations NE Asia, Siemens Healthcare, Beijing, China, People's Republic of, 2Radiology, Xuanwu Hospital, Capital Medical University, Beijing, China, People's Republic of
Synopsis
In
recent years, the study of dynamic changes within brain functional networkshas become
a trend topic in the fields of neuroscience and neuroradiology. In this study,
we proposed a time-pointbased analysis method to search for dynamic pattern changes
in normal controls, AD and two MCI stages.We aim to investigate whether the DMN
deficit we observed in previous studiesis related to changes of activity
frequency of micro-state network condition.The results show that the dynamic
patterns obtained by the time point-based analysis could detect several DMN micro-states
and the frequency of the appearance of these micro-states changes during the
progress of cognitive impairment.PURPOSE
Resting-state
fMRI (rs-fMRI) has been widely used to test the functional network1changes
in the investigation ofthe mechanism of Alzheimer's disease (AD) and mild
cognitive impairment (MCI). Most of these studies analyzed the whole period of
rs-fMRI data based on the long-term correlation between voxels however, the
brain function changed very fast and the network states we obtained from
6-10min fMRI data integrate several shorter states. In recent years, the
dynamic changes of brain functional network have become a trend topic both in
neuroscience and neuroradiology fields but most of the work based on rs-fMRI recursively uses the correlation coefficient extracted from a small sliding
window. In this study, we proposed a time point-based analysis method to observe
dynamic pattern changes in normal control, AD and two MCI stages and
investigate whereas the DMN deficit we observed in previous studiesis related
to some changes of activity frequency of micro-state network condition.
METHODS
Four
groups of subjects were enrolled in this study, including AD, late MCI, early
MCI and age-matched NC. The group size of each group is 30. MRI exam included
routine protocol for screening obvious lesions and a resting-state fMRI (rs-fMRI)
session. The parameters of rs-fMRI are as follows: TR=2000 ms, TE=30 ms, flip
angle=90°, 33 slices, slice thickness=3.5 mm, distance factor=20%, FOV=210 ×210
mm2, matrix= 64×64, measurements=200. All data were collected on a MAGNETOM Tim
Trio 3T MR scanner (Siemens Healthcare, Erlangen, Germany).The pre-processing
steps include: 1) removing the first 10 frames 2) slicetiming correction 3)
head motion correction 4) spatial smoothing with Gaussian kernel, 6mm full
width half maximum 5) removing the linear trend and regressing out 9 covariance
parameters including global signal, white-matter signal, ventricle signal and 6
head motion parameters 6) projecting the volumetric data from each individual’s
natural space to the standard surface space (fsaverage) using Freesurfer
pipeline.
For each
subject, we extracted the pre-processed data from the DMNbased on a functional
network template derived from 1000 normal subjects.2For each time
point, a vector was constructed based on signal extracted from each vertex
within the DMN. Then all vectors of the four subject groups were clustered into
several groups using k-means algorithm. The number of groups was optimized
according to the Davies-Bouldin index. In each group of vectors, the
t-statistic value of each vertex was calculated across all time points to
create a temporal state of DMN. The t-values with p>0.01 were set to 0.For
each subject, the time points belonging to each cluster were counted. Then
group analyses were used to test the differences in the appearance frequency
for each separate cluster among groups.
RESULTS
There
are 4 clusters showingsignificant differences between groups (c3,c4,c5,C6). The
topography of these clusters is shown in Fig.1 (left). The c1 and c2 are the
clusterswith the highest appearancefrequency during resting-state fMRI exam forall
subjects. From the topography of c1 and c2, we could see they are the standard
activation and deactivation patterns of the whole DMN.The c3-c4, c5-c6 are also
paired as activation and deactivation patterns that have almost the same
appearance frequency in each individual subject.In the network state shownin
c3-c4, the posterior cingulate (PCC) and lateral parietal cortex (LPC) werenot
involved. And this states' appearance frequency showedsignificant decreases in
all patient group.The other network state shownin c5-c6 demonstratedA
micro-state of DMN that only involved the frontal lobe and a small part of LPC
and mid temporal lobe areas of DMN.There are significantly higher percentagesof
c5-c6 in patient groups than in normal control.
DISCUSSION
Many
previous studies havereported the differences of functional connectivity in PCC
and LPC between NC and AD. If we average these different clusters across the
whole experiments, our evidence agrees with previousseed-based or ICA-based
analyses.The functional deficit reported in PCC and LPC may be because the
synchronization betweenseveral sub-parts of DMN has been broken in AD.
CONCLUSION
The
dynamic patterns obtained by the time point-based analysis detected
severalmicro-states of DMN. The appearance frequency of these micro-states will
change during the cognitive impairment progress.
Acknowledgements
No acknowledgement found.References
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network[J]. Neuroimage, 2010, 50(1): 48-55.
2. Yeo
T, Krienen M, Sepulcre J, et al. The organization of the human cerebral cortex
estimated by intrinsic functional connectivity. J neurophysiology, 2011:106(3),
1125-1165.